Strain | Pseudomonas aeruginosa Z61 adkgo-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTCCTCGCCCTGCAAGACGTGACTGGCTTTGAACATCACGCCCTCCTCTTGTGGAGCCATTGTTATTGAAAGAAGTCCGTCCAGGCGTCCATTGCCCGG GGCACCGCCGCCGGCGGGTTGTGCCGGCGGCGCGGCACGTCCTGTGGCGCGGGAATACGGATCAGTATGGGTCAGGCCCATTCCGCCGGCGCGAGGCACC AGCGGATAGCGGAATGTAGTGGCTGCGAGAGGGGCGATTCTTGCGAAAGACTCTGGAGTTTTTGCGGAAAACTCCTGGCTGCGGAACTTTCCCGTTCCTC TTCGCCGGCAGGCATGCGGACATTGCCGCTGCACGTCGGCACGACGCCATGCAGAGTGGCTACGCGGGTCTACCGACACAAAAAGAAATAATATAACATC CCAATAAATACGCCGATCCGACCCCGTCGCCCTTCCTCCGGGAAGGGCCTGGGTTCGCTTTGGCCTGAAAAAAGTCCGACCCATGACCATGGAGCCCGCA
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DNA Sequence for Gene |
>Q054_00108
ATGTCCTCTTCCGGCCTTTTCCCTTCCCGTCCGCTCTGGCCTCTCACGCCACTGGCGCTGGCCTGCCTGATTGTTTCGGGGGAAACGCTCGGCGCCGACG GCCGCCCCAGCGAATTGCCCTCCCAGGTGATCACCGCCAACCCGCTGGGCAACGAATCTCCCGCCACGCCCAGCAGCGTGCTCGAAGGCGACGAGCTGAC CCTGCGACAGAAAGGCAGCCTCGGCGAAACCCTCAACGGCCTGCCCGGGGTGTCCTCCACCTACTTCGGACCGGGCGCCAGCCGACCGGTGATCCGCGGC ATGGACGGTGATCGCATCCGCCTGCTGCGCAACGGCATCGGTGCGCTCGACGCCTCGTCGCTGTCCTACGACCACGCGGTGCCGGAAGACCCCAACAGCG TCGAGCGCCTGGAAGTGGTACGCGGCCCGGCCGCCCTGCTCTACGGCGGCAATGCCATCGGCGGGGTGGTGAACAGCTTCGACAACCGCATCCCCAGCGA ACCCGTCGACGGCATCCACGGCAGCGGCGAACTGCGCTACGGCGGCGCCGACACCACCCGTAGCCGCTCCGGCGCACTGGAGGCCGGCGACGGCAACTTC GCCCTGCACGTGGACGCCGCCAGCCGCGAGTTCAACGACGTCAGGATTCCCGGCTACGCCCATTCCAGCCGCCAGCGGCAGATCGACGGCGACACCGGCA AGCATCGGGTGCAGAACAGCGACGGCCGCCAGGACGGCGGCGCCGTCGGTGGCTCCTATCACTGGGAGCACGGTTACGCCGGCCTCTCCTACAGCGGCTA CGACAGCAACTATGGCTCGCCGGCCGAGGACGACGTGCGCCTGAAGATGCAGCAGGACCGCTACGCCTTCGCCTCCGAGATCCGCGACCTCGAAGGCCCG TTCACCTCGCTGAAGCTGGACGCCGCCTATACCAAGTACGAGCACAAGGAAATCGAGGACAGCGAGACCGGCACCACCTTCAAGAACGAAGGCTACGAAG GCCGCATCGAGGCCCGCCACCGCCCGCTCGGCCCGCTGAACGGGGTGGTCGGCGCGCAGTTCGCCAACAGCCGCTTCTCCGCCCTCGGCGAGGAAGCCTT CGTGCCGCACACGGAAACCGACAGCGCCGCGCTGTTCGCCCTGGAGGAATGGAAGCTCAGCGACCGCCTCGACCTCAGCTTCGGCGCCCGCCTGGAGCAC ACCCGCGTGGACCCCGACGCCAAGGGCAACGAGCGCTTCGCCGAGAACGACGGTTCGCAGAGCTTCACCACCGGCAGCCTGTCCACCGGCGCGGTGTACA AGCTGACGCCGATCTGGTCGCTGGCCGCCACCCTCAGCTACACCGAGCGCGCCCCGACCTTCTACGAGCTGTACGCCAACGGTCCGCACGCCGCCACCGG CACCTACGAGGTAGGCGATGCCGACGCGGACAAGGAAAAGGCGGTCTCCACCGACCTCGCCCTGCGCTTCGACAACGGCGTGCACAAGGGCAGCGTCGGG GTGTTCTACAGCCGCTTCTCCAACTACATCGGCCTGCTCGCCAGCGGTCGCCATCGCAACGAGGAAGGCGAAGTGGTCGCCGCCGGCGATGACGAGGCGC TGCCGGAATACCTCTACAGCGGCGTTCGCGCGGACTTCTACGGCGTCGAGGCGCAGGACCGCATCCACCTGCTGGAAAGCCCGTACGGCAACTTCGACCT GGAACTCTCCGGGGACTACACCCGCGCCAAGAACAAGGACACCGGCGAACCGCTGCCACGCATCGCCCCGCTGCGCCTGAACACCGCGCTGATCTGGGAG TTGCAGCAGTGGCAGGCGCGGGTCGACGTCGAACACGCCGCCTCGCAGCACCGCGTGCCGGAGGAAGAACTCTCCACCGACGGCTACACCACCCTCGGCG CCAGCCTCGGCTACAACTTCGACCTCGGCGAGAGCCGCTGGCTGGCCTTCGTCAAGGGCACCAACCTGACCAACCAGACCGTGCGCTACGCCAGTTCGAT CCTGCGCGACCGGGTGCCGGCGGCGGGACGCGGCATCGAGGCGGGGGTGAAGGTGGCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GACAGGCCGTGCGGGACGAATTCGCTCGGCGGATGACGTCCGCGCCGTTATCCGTCCTACACCACTCCCGGTAGGGCGAATAACCGCCTGCGGTTATCCG CCGAAGGTGGCGGATGGCGCTCAGCCCTTGCGCAGCGACTTCGGCGTCAGCCCCAGGTAGCGGCGCATCGCCGTGGTCAGCGCGCTCTGGCTGGAGAAGC CGCATTCCTCGGCGATCCGCACCAGAGGCAGGCGGCTTTCCCGCAGCAACCGCGCGGCGCAGTCGAGGCGGACCTTGAGCAGGTACTGGTGCGGGGTCAG GCCGACGCTGTCCTTGAACTGCGCGTGGAAATGGCTCGGGCTGAGACAGGCGACCTGGGCCAGTTCGGCGACCGTGATGCGCCGCGCCAGGTTCCGCACG ATATGCGCGTCCAGGCGCTCCAGGTCGAGCGGCCCGCTGGCCGCCAGGGGCTGCTGCTCGCCGAACAGGCGCAGGTGCAGGGCGCGGATCAGCACTCCGC
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Amino Acid Sequence |
>hypothetical protein
MSSSGLFPSRPLWPLTPLALACLIVSGETLGADGRPSELPSQVITANPLGNESPATPSSVLEGDELTLRQKGSLGETLNGLPGVSSTYFGPGASRPVIRG MDGDRIRLLRNGIGALDASSLSYDHAVPEDPNSVERLEVVRGPAALLYGGNAIGGVVNSFDNRIPSEPVDGIHGSGELRYGGADTTRSRSGALEAGDGNF ALHVDAASREFNDVRIPGYAHSSRQRQIDGDTGKHRVQNSDGRQDGGAVGGSYHWEHGYAGLSYSGYDSNYGSPAEDDVRLKMQQDRYAFASEIRDLEGP FTSLKLDAAYTKYEHKEIEDSETGTTFKNEGYEGRIEARHRPLGPLNGVVGAQFANSRFSALGEEAFVPHTETDSAALFALEEWKLSDRLDLSFGARLEH TRVDPDAKGNERFAENDGSQSFTTGSLSTGAVYKLTPIWSLAATLSYTERAPTFYELYANGPHAATGTYEVGDADADKEKAVSTDLALRFDNGVHKGSVG VFYSRFSNYIGLLASGRHRNEEGEVVAAGDDEALPEYLYSGVRADFYGVEAQDRIHLLESPYGNFDLELSGDYTRAKNKDTGEPLPRIAPLRLNTALIWE LQQWQARVDVEHAASQHRVPEEELSTDGYTTLGASLGYNFDLGESRWLAFVKGTNLTNQTVRYASSILRDRVPAAGRGIEAGVKVAF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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