Strain | Pseudomonas aeruginosa BWHPSA048 adkfS-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTTTCACACCGGCCTGATGAACCACTTGCAGCACCGCGAACTCCTGTTCGCGGTCAAGGCTGGCGGGTAGCGCGGAAAGCGCATCGCTGCGCAGCACCCA ACGCCGGGCGCCAGCCCAGGGGCCGCCTTCGATCAGCAGGTCCAGCAGCCAGTTTTCCTGGATGGCGCCGCCGCTCAGGCGCTGGCGTGCCTGGATGACC ACCCGCTTCGCTGCGGCGTGCTCGCGGATGAACTCGACCAGTGGCTGGTCGTCCGGGGCCACGAATGTCTCGCCGTCCCGTACGGTCGTAGGAGGAGTGC TCATGGGGTTGTAGGGCCTGCCTGTAGTCATGTTGTCAGACAGCTTTAGCAACGCCTGGGCCAATTTTCGGGATATGCCTGTAACCCGCGCGCTCTCTGG CGCCAGGTTTTTCCATGGCGCTCGACGAAGCAATCCGGGTTTCACTTTTGCAACGAACTGATTCAGTATCGAAACAATTCAATCCTGAACAGGTCTCGAC
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DNA Sequence for Gene |
>Q053_02818
ATGCGTCCTCCCCTTTCCCAGGTCGTCGTGCTGGTCAGTCACCTTCAACGACCTCGGCAGCGCAGTCGCCTCGCCAGCCTGGTGGCCGGCCTGGCGGCGG GCTACCCGGACGTCCATATCGAGGTGCTCGACACCTCGGTATCCGAAGCCCTGCAAACCGCCCGCGATCTCGAACAGCGCGGCAAGGCCGACGTGTTCGT CTGTGCTGGCGCCACTGCCGCCTACCTGCGTAGACACCTGGCACGTCCGGTTCTGACGATGCGTGTTGGCGGCGGAGACCTGTTGCGTGCGCTGGAGCAA GCCCGCGAACACTCCTCCCATGTCGCCCTGCTCAGCTACAACCGCATCGACCGGGACCTGCAAGCCATGCGAACGCTGTTCACGGTGCAGGTTCACCAGG TCGCCTACACCACCCTGGAAGAGGCTCGCCAGGCTGTCCTGGAGGTATCCCGCCTGGGTTGCCGCAGCATCATCGGTTCGTCGACGGTGGTGGAGCTGGC GGAACAGGCAGGCCTGCACGGCGTGCTGTCGCTGAGCGAAGACACTGCGCGCAAGGCGCTCGAGGAAGCCATGGGAGTCCTCGACAGCCAGCGCCTGGAG ATCGCCAAGCGGCGGCATCTGGACGCGGTGCTGCAACACATTCCAAGCGGTGTGGCAGCGGTCGACAACCAGGGTGTGGTGCAATCGCTCAACCCTGCCC TTGCCCAGTTGCTGGAGTTGCCGGTCAGCTCGGCTCTGGGGCGACCGTTACAGCAGCTATGCCCGGAGCTTGACCTGCAGCAGGCGCTAGAGGATGGCGG TGGCGAGGAAAACCGGGTGATCCGGCTGGGCTCGCACGCCGTGGTCAGCAATCTCCTGCCGATCCTGGAGAATGGCGAGCGTACCGGCCTGGTGCTCACC TGCCAAGACATCACCGCCGTGCAGCGCGCGGATCAACGCATCCGCTCCACTCGCCGTCCAGGTGCCTTCACCGCGCGTTACCGGCTCGAACAACTCAACG GCGCGAGCAAGGCCAACCGTGAGATGTTGCAGCTGGCCAAGCGCTTTGCCGCCAGCCATTCGACCATCCTGATCACTGGCGAAAGCGGCACCGGCAAGGA ACTGCTCGCCCAAGGGATCCATAACGAGAGCCCTCGCCGGCACGGGCCTTTCGTCGCCATCAACTGCGCGGCGTTTCCCGAGTCGCTACTGGAAAGCGAA CTGTTCGGCTACGAGGAAGGCGCCTTCAGCGGTTCGCGCAAAGGCGGCAAGCCCGGCCTGTTCGAGGCGGCGCACCGTGGCACGCTGTTCCTCGACGAGA TCGGCGACATGCCTGTGTCGCTGCAGACTCGCCTCCTTCGTGTATTGCAGGAGCGAGAGGTCTTGCGCCTGGGCGGCACCGAGCCGATCTCCATCGACGT GCGCATCGTCGCCGCCACCCACAAGGACCTGGGGGCCGCCATGAAGGATCGCGAGTTTCGCACCGACCTGTATTACCGGCTGAATATCCTGCGCTTGCAG ACCACGCCCCTGCGCGAGCGGCCCGAGGACATTCCTCTGATTTGCCAGGGAATCAGCCAGCGCCTGCTGGTCCAGGGCCAGCCACCGGGTGCCGCAGGCA TAACGACGCTCCTGCTACCCTACCTCGTCCGCCATTCCTGGCCCGGAAACGTCAGGGAACTGGAGAATGTCATCGAACGGGCGATGCTCTCCGCCAGCGA AATCTTCCATGAGCACGGCGTGGATGAGCATTACCTGGCTCGCGTGCTGCCCGAGCTATTCGAAGGCCAGCCTCAGCCCAGGTCCCGGAAAGAGCCATCG CGCACAAAGGATTTGCACGCCATCGGCAAAACCGCGCAGTTGCGCTACATACAGGAGACGCTGGACAGCTGCCAGGGCAGCCTTGACGAGGCTGCGCGTC GGCTCGGGATCAGCCGGACCACGCTGTGGCGGCGGCTTCGCTCGGCACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCAAAACGATGCGCCTGGGCGATGCGGAACTCGCCCAGGCATGGACACGGCCGGTGCCGTGAAACTCAATTGATCAGCGGAACCTGCTTGCCGATCTGCA ACGCCTCCAGCGCGTCCAGTTGCGCTTCGATCTGCAGGAAGCGCATGGCCCGCCGAGGTGACATCTTCTCGGCCACTTCCTGCACGTACCGGTGCAGCAC GGACAGCTGTTTCTCCTGCAATCCCCGATAGAGGTCGACCATCCTCGAAGCTTCCGCGTCGGTAATGCTGCCGGAACCATAGGCGCGGGCATATTCGAGC AGGAGCTGGAATGTCTCCTTGTGCAGGCTGTCCGTCTCGCCTCGGTAGCGTGAATAGATCGGCCAGAACGTCTCGGCTTCGGTGCCGTCCAGCGCCATGT TTGCCTCGACCATCCGTTTGCGCTTGTAGTTGATGGTTTCCAGCTGGTTCCTGATCTTTTCCTTGTGCTCGTTCATCACCTGCTCGACCGATGGCAGGGG
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Amino Acid Sequence |
>propionate catabolism operon regulatory protein PrpR
MRPPLSQVVVLVSHLQRPRQRSRLASLVAGLAAGYPDVHIEVLDTSVSEALQTARDLEQRGKADVFVCAGATAAYLRRHLARPVLTMRVGGGDLLRALEQ AREHSSHVALLSYNRIDRDLQAMRTLFTVQVHQVAYTTLEEARQAVLEVSRLGCRSIIGSSTVVELAEQAGLHGVLSLSEDTARKALEEAMGVLDSQRLE IAKRRHLDAVLQHIPSGVAAVDNQGVVQSLNPALAQLLELPVSSALGRPLQQLCPELDLQQALEDGGGEENRVIRLGSHAVVSNLLPILENGERTGLVLT CQDITAVQRADQRIRSTRRPGAFTARYRLEQLNGASKANREMLQLAKRFAASHSTILITGESGTGKELLAQGIHNESPRRHGPFVAINCAAFPESLLESE LFGYEEGAFSGSRKGGKPGLFEAAHRGTLFLDEIGDMPVSLQTRLLRVLQEREVLRLGGTEPISIDVRIVAATHKDLGAAMKDREFRTDLYYRLNILRLQ TTPLRERPEDIPLICQGISQRLLVQGQPPGAAGITTLLLPYLVRHSWPGNVRELENVIERAMLSASEIFHEHGVDEHYLARVLPELFEGQPQPRSRKEPS RTKDLHAIGKTAQLRYIQETLDSCQGSLDEAARRLGISRTTLWRRLRSAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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