Strain | Pseudomonas aeruginosa BWHPSA047 adkfX-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GACTCACGCACAGAAGACCCACACTTTATCCACAGGTTTCCCCCAGACTGTCACCTTGCAAACACCCCATTAGCGCATTATCTTGTATCCCCATCGTCGC CACCCCCTATATCTTGGGTTTCGAGCGCACGAACGGCTACAACGGAACCAACCGCGCACGGACCACTCTGATGGCTCCGGCGGCTCCGCAAAAAAGCATT TTCCAGACGTACTGAAAGCATCGACGGCGCTCACCGCAAGAGCCCTTCATGACGATGGAAAAGCGGTACGGGTGTTGCAACGGACGCTGTAAACAGACAG TCAACACCACTAGGTATTGTGTTCGACGGCAAAACGCCACGAACCCGCCAGGGCCAGGGAGGCACGCACAGTCCCCACCCTCAGCATTCGAATGAAGCAG CCGCCGCGAGGCCGGCTGCCCGGCTCTTTATCGATTCAAGGGAATGGGCGCCCCGGCGCCCGCTAGCAAAACCATTACGAGAACGTGGAGATACCCACCC
|
|
DNA Sequence for Gene |
>Q052_00634
ATGCATACCGACACCACACGCGAGAACCCGCAGGCCAGCGCGCCGCAGGCCGCCGATTCGTCGCAGGATCTGGCCGCCACCGCGCCGGGCCAGCTGCGCG TGATCAAGCGCAACGGCACCGTAGTCCCCTACACCGATGACAAGATCACCGTGGCCATCACCAAGGCGTTCCTCGCCGTGGAAGGCGGCACCGCCGCCGC CTCGTCGCGTATCCATGACACCGTGCGCCGCCTGACCGAGCAGGTCACCGCCACCTTCAAGCGCCGCATGCCGTCCGGCGGCACCATCCACATCGAAGAG ATCCAGGACCAGGTCGAACTGGCCCTGATGCGCGCCGGCGAGCAGAAGGTCGCCCGCGACTACGTGATCTACCGCGAAGCCCGCGCCGCCGAGCGCAAGA ACGCCGGCGCCGCCAGCGATGTCGCCCAGCCGCACCCGAGCATCCGCATCACCCGCGCCGACGGCAGCCTGTCGCCGCTGGACATGGGCCGCCTGAACAC CATCATCAGCGAAGCCTGCGAAGGCCTGGCCGAGGTGGACGGCGCGCTGATCGAGCGCGAGACCCTGAAGAACCTCTACGACGGCGTCGCCGAGAAGGAC GTCAACACCGCCCTGGTGATGACCGCGCGCACCCTGGTCGAGCGCGAGCCGAACTACTCCTACGTCACCGCCCGCCTGCTGATGGACACCCTGCGCGCCG AAGCCCTGGGCTTCCTCGGCGTGGCCGAGAGCGCCACCCATCACGAAATGGCCGAGCTGTACGCCAAGGCCCTGCCGGCCTACATCGAGAAAGGCGCCGA GTTCGAGCTGGTCGATGCCAAGCTGAAGGAATTCGACCTGGAGAAACTGGGCAAGGCCATCGATCACGAGCGCGACCAGCAGTTCACCTACCTCGGCCTG CAGACCCTGTACGACCGCTACTTCATCCACAAGGACGGCATCCGCTTCGAACTGCCGCAGATCTTCTTCATGCGCGTGGCCATGGGCCTGGCCATCGAGG AGAAGGACCGCGAGGCACGTGCCATCGAGTTCTACAACCTGCTGTCGTCCTTCGACTACATGAGTTCCACCCCCACCCTGTTCAACGCCGGCACCCTGCG TCCGCAGCTCTCCAGCTGCTACCTGACCACCGTGCCGGACGACCTGTCGGGCATCTACGGCGCCATCCACGACAACGCCATGCTGTCGAAATTCGCCGGC GGCCTGGGCAACGACTGGACCCCGGTGCGCGCGCTGGGCTCCTACATCAAGGGCACCAACGGCAAGTCCCAGGGCGTCGTGCCCTTCCTGAAAGTGGTCA ACGACACCGCGGTCGCGGTCAACCAGGGCGGCAAGCGCAAGGGCGCGGTCTGCGCCTACCTGGAGACCTGGCACCTGGACATCGAGGAATTCCTCGAGCT GCGCAAGAACACCGGTGACGACCGTCGTCGTACCCATGACATGAACACCGCCAACTGGATCCCCGACCTGTTCATGAAGCGCGTCTTCGACGACGGCTCC TGGACCCTCTTCTCGCCGTCCGACGTCCCCGACCTGCACGACCTCTACGGCAAGGCCTTCGAGGAGCGCTATGAGTACTACGAGGCCCTGGCCAGCTACG GCAAGCTGAAGCTGCACAAGGTCGTCCAGGCCAAGGACCTGTGGCGCAAGATGCTCTCCATGCTGTTCGAGACCGGCCACCCGTGGCTGACCTTCAAGGA CCCGTGCAACCTGCGCAGCCCGCAGCAGCACGTGGGCGTGGTGCACAGCTCGAACCTCTGCACCGAGATCACCCTGAACACCAACAAGGACGAGATCGCC GTCTGCAACCTGGGCTCGATCAACCTGGTCAACCACATCGTCGACGGCAAGCTGGACACCGCCAAGCTGGAGAAGACCGTCAAGACCGCGGTACGCATGC TCGATAACGTCATCGACATCAACTACTACTCGGTCCCGCAGGCGCAGAACTCCAACTTCAAGCACCGTCCGGTCGGCCTGGGCATCATGGGCTTCCAGGA CGCCCTGTACCTGCAGCACATCCCCTACGGTTCGGACGCGGCCATCGCCTTCGCCGACCAGTCCATGGAAGCCATCAGCTACTACGCGATCCAGGCTTCC TGCGACCTGGCCGACGAGCGCGGCGCCTACCAGACCTTCCAGGGCTCGCTGTGGTCGCAAGGCATCCTGCCGATCGACTCGGAGAAGAAGCTGATCGAAG AGCGCGGCGCCAAGTACATCGAAGTCGACCTGTCGGAAACCCTCGACTGGGCGCCGCTGCGCGAGCGCGTACAGAAAGGCATCCGCAACTCGAACATCAT GGCCATCGCGCCGACCGCGACCATCGCCAACATCACCGGCGTCTCGCAGTCGATCGAGCCGACCTACCAGAACCTGTACGTGAAGTCGAACCTCTCCGGC GAGTTCACCGTGATCAACCCCTACCTGGTGCGCGACCTCAAGGCCCGCGGCCTGTGGGACCCGGTCATGGTCAACGACCTGAAGTACTACGACGGTTCCG TGCAGCAGATCGAGCGCATCCCGCAGGACCTCAAGGACCTCTACGCCACCGCGTTCGAAGTCGAGACCCGCTGGATCGTCGAAGCCGCCAGCCGTCGCCA GAAGTGGATCGACCAGGCCCAGTCGCTGAACCTGTACATCGCCGGCGCCTCGGGCAAGAAGCTCGACGTGACCTACCGCATGGCCTGGTTCCGCGGCCTG AAGACCACCTACTACCTCCGTGCCCTGGCCGCCACCAGCACCGAGAAGTCCACCATCAACACCGGCAAGCTCAACGCCGTGTCGGCCGGTGGCAACGACG GCCTGCAAGCCGCCCCGGCCGCCGAGCCGAAGCCGGCGCCGGTGCCGCAGGCATGCAGCATCGACAACCCCGACTGCGAAGCCTGCCAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TCGCGCGTCGCTGAACGGCGTCCGTGTCGCGGCCGGGCAAGCCGGACTCCCCCTGTGAGTCCGGCCTGTCCGGCGCCTGACGGTCGCTCGTCCAGCGCCA CGCTGGCAGCGCAAGGCCCCTCGCCAGGGCCAGGAACAATCCCCTTCTTCCCTCCGGGGGAGAAGAACGGCCCGGCCAGACCGTGCCGGACCACCGCTTT CGCGTGCACCTCACGCCCCATATCCAGGCCGCCGAGACGGCCGCCAGACCAGGAGAGAGCAAGATGCTGAGCTGGGACGAATTCGACAAAGAAGACCCGA CCGAAGCCAAGGCCGCGCCCGCCGCCGCCCAGGCCGTTGCCCAGGGCCATGACAAGCTGGACGACGAAGCCGCCGGCTCGGTGGAAGAAGCGCGCGCCGT TTCCGCCGACGACTCCGACGCCGTCGCCCGCGCCAAGAAGGCCCTGAACGACCTCGACATCCAGGAAGGCCTGGACGACCTCGAAGGCTCCGCCGCGCGC
|
|
Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit alpha
MHTDTTRENPQASAPQAADSSQDLAATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGTAAASSRIHDTVRRLTEQVTATFKRRMPSGGTIHIEE IQDQVELALMRAGEQKVARDYVIYREARAAERKNAGAASDVAQPHPSIRITRADGSLSPLDMGRLNTIISEACEGLAEVDGALIERETLKNLYDGVAEKD VNTALVMTARTLVEREPNYSYVTARLLMDTLRAEALGFLGVAESATHHEMAELYAKALPAYIEKGAEFELVDAKLKEFDLEKLGKAIDHERDQQFTYLGL QTLYDRYFIHKDGIRFELPQIFFMRVAMGLAIEEKDREARAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYGAIHDNAMLSKFAG GLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGS WTLFSPSDVPDLHDLYGKAFEERYEYYEALASYGKLKLHKVVQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIA VCNLGSINLVNHIVDGKLDTAKLEKTVKTAVRMLDNVIDINYYSVPQAQNSNFKHRPVGLGIMGFQDALYLQHIPYGSDAAIAFADQSMEAISYYAIQAS CDLADERGAYQTFQGSLWSQGILPIDSEKKLIEERGAKYIEVDLSETLDWAPLRERVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSG EFTVINPYLVRDLKARGLWDPVMVNDLKYYDGSVQQIERIPQDLKDLYATAFEVETRWIVEAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWFRGL KTTYYLRALAATSTEKSTINTGKLNAVSAGGNDGLQAAPAAEPKPAPVPQACSIDNPDCEACQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|