Strain | Pseudomonas aeruginosa BWHPSA046 adkgc-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCGTTCCAGCAGCGGCGCCGGCATGCGCGGCGCGCCGCGCATGATCTCGCAGGAGAAGACCCTGGCCGCGTGCGGCCGCTCGGCGCCGATGCGCATCTT GTTGTCGACGTAGGCGCGTAGCGCCTCGGCGGGCGGCTGGTCGCCGGCGAATGGCCGGGAGGCTTCCAGCAGGGGCTCGACGATGCTGTCCAGCACCGCC TCGTAGAGTTGCGCCTTGGAGCGGTAGTAATAGAGCACGTTGGCCTTCGCCACGCCGGCGCGCTCGGCGATGTCGCTGAGCCGGGCGGCGCTGAAGCCGC AGTCGGCGAAGACTTCGCAGGCGGCGTCGAGGATCAGTTGCAGGTTGCGTTGGCGGATCTTCTTCATCGGGACCGATACGGGGCAGGTTTCGTTGTTAAT ATTTTTATATAACGAACGCCTTGTGCCTGGATAGTCGTCGTCAGGCCGGCGACGCTTGATCGGATGCGCATTGCCAAGCCGTGGGGGCGCTGGTATCTGT
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DNA Sequence for Gene |
>Q051_00852
ATGCATGAACAGTACCAGGCTCCGCTTCCCGTGAATTCCCCAGCGCTTCCCGAACCCTTCTACTACCTGCACAACTTCCGCGCGGTGCTCGCCTGGATCG GCGAACGCTATGCCGATCTGCTCGACGATCAGGAACGTGCCTTCATCGCCGCGTTCGCCGAGCTGCCCGAGGCCAGCCAGGCCCTGCTGGTGCGCATGGT GATGCGCAAGGGCACGCTGTTCCGCGAAGGCAAGCTGGCCTATGCCGAGATCGGCGACACGCGCGCCGCCGTACAACCGCTGTTGGCATTGGGCTGGGTG GACGCGCAGCCGACCCTGGAACTGGCGCAACTGTTCGGCTTGCTGAGGAAGGACGAATTGTCGCAGCTGTTCAGGGACCATCTCGGGCGCGCGAACCTGC GCAAGGATGCGTTGCTGGAACGGCTCCAGCCGTTGTTCCCCGAGGCGCGGCGGCTCGCCGAGTGGCAGGCCGACTTCGCCGAACCGGTCTACGAGTTGCG CTGCATGGCGCTCTGCGACCGCTTGCGGTTGATGTATTTCGGCAACCTGTGGCAGGACTGGTCGGAGTTCGTCCTTGCCGACCTGGGTATCTATCGTTAC GAAAGCGTCGAGTTTTCCGCCGACTCCCGCGGCTTTCGCCTGCGCGCCGACGTCGACGCCTATCTCCACCTGTTCGACTGCCGCCAGCGCTTCGACCTCG GCGAGCCGCTGGAGGAACTGCTCGCCGGCCTGCCGGGCGAACCCTACGCCAATCCCTGGCTGGAAGGGCGGCGGGTCAAGCTGCTGTTCCAGTTCGCCCA GCACTGCGAAAAGCAGCGGGATTTCGACCTGGCCCAGCGGCTCTATCGCCAATCCAGCCACCCCGGCGCGCGCCTGCGGGCGATTCGCAGCCTGGAACGC GGCGAGCGCTTCGCCGAAGCCCATGCATTGGCGCGGGAGGCCAGCTGTGCGCCGGAAAGCGACGCCGAACGCCAGGGCCTGGCCCGATTGCTGCCGCGCC TGCAAGGCAAGCTCGGCCTGCCGCGACAGGCGCGGGCGGCGGCTCCGGAAATCGACCGCCTGGACCTGTGCCTGGCGTTCCCGAGCGAACCCTGTAGCGT CGAGTGGGCGGTTCGCGAGCACCTGGAAGAGCCCGGTTGCGCGGTGCACTACGTCGAGAACGGCCTGATCAATTCGCTGTTCGGGCTGCTCTGCTGGGAG GCGATCTTCGCCGCCATTCCCGGGGCGTTCTTCCATCCCTTCCACAGCGCGCCGGCGGACCTGCACAGCGCCGACTTCCGCCAGCGCCGCGCCGCCCTGT TCGAGGCCTGCCTGGGACGGCTGGAGGACGGCAGCTACCGCGACGCGATCCGCTGTCGCTACCGCGACAAGTTCGGCATGCAGTCGCCCTTCGTCTACTG GGAACTGCTCGGCGAGGAACTGCTCGAACAGGCGCTCGATTGCCTGCCGGCGGCCCACCTGCGCGCCTGGTTCGAACGCCTGCTGGAGGATATCCCGGGC AACCGCGCCGGCCTGCCGGACCTGATCCAGTTCTGGCCGGCGCAGCGGCGCTACCGGATGGTCGAGGTCAAGGGACCGGGCGACCGCCTGCAGGACAACC AGTTGCGCTGGCTGCAATTCTGCCGCGAGCGGGAGATGCCGGTGGCGGTCTGCTACGTGCGCTGGCATGTCGATGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCAGGGCGGCGAGGCGCTGTACCAGGTGGCGGTGCGCGCGCTTTGCGAGTTCAGCGCCAAGCGCGGCGACCTCGACCTGCGCTTCACCCCGTCGCCCAGC GCCCTGGAAGGCATCGCCGGACATACCCTGGTGACCTCCCGGCGCCCCGCTCACTACCAGCGCGAAGTGGCGCTGGACGGACGCTACCGTCACTTGCAGG TGCGCGGCCGGGCGGATGGCTACGATCCGCAGGCGAACTGCCTGGAGGAAATCAAGACCCACCGCGGCGACCTCGCCCTGCAACCGGCCAACCACCGGCA CCTGCACTGGGCCCAGGCCAGGGTCTACGGCTGGCTGCTCTGCGCCGAACGGAAGCTGGAGGAAGTCGAACTGGCGCTGGTCTACCTGGAGGTCGGCAGC CAGAAGGAGACCCGCTTCGTCGAGCGGGTGCGGGCCGACGAGCTGCGGCTGTTCTTCGAGAGCCAGTGCCAGGCGTTTCTCGCCTGGGCCGAGCAGGAAC
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Amino Acid Sequence |
>hypothetical protein
MHEQYQAPLPVNSPALPEPFYYLHNFRAVLAWIGERYADLLDDQERAFIAAFAELPEASQALLVRMVMRKGTLFREGKLAYAEIGDTRAAVQPLLALGWV DAQPTLELAQLFGLLRKDELSQLFRDHLGRANLRKDALLERLQPLFPEARRLAEWQADFAEPVYELRCMALCDRLRLMYFGNLWQDWSEFVLADLGIYRY ESVEFSADSRGFRLRADVDAYLHLFDCRQRFDLGEPLEELLAGLPGEPYANPWLEGRRVKLLFQFAQHCEKQRDFDLAQRLYRQSSHPGARLRAIRSLER GERFAEAHALAREASCAPESDAERQGLARLLPRLQGKLGLPRQARAAAPEIDRLDLCLAFPSEPCSVEWAVREHLEEPGCAVHYVENGLINSLFGLLCWE AIFAAIPGAFFHPFHSAPADLHSADFRQRRAALFEACLGRLEDGSYRDAIRCRYRDKFGMQSPFVYWELLGEELLEQALDCLPAAHLRAWFERLLEDIPG NRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQDNQLRWLQFCREREMPVAVCYVRWHVDD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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