Strain | Pseudomonas aeruginosa BWHPSA044 adkfY-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGCGATTTGCGCGTCGGTGGCCAGCACCAGGGTGGTCAGCAGGTCGTTGGCCACGCCCTGGACCAGGCGCGCCATGAGGTCGGCGGTGGCCGGTGCGAT CAGCACCAGATCGGCCCAGCGGGCTAGTTCGATGTGGCCCATCGCGGCTTCCGCCGCCGGGTCCAGCAGATCGGTGTGCACCGGATGGCCGGACAACGCC TGGAGGGTCAGGGGCGTGATGAACTCGCGGCCGCCCTGGGTCATCACCACTCGGACTTCAGCGCCCTGGTCGCGCAGGCGGCGGACCAGTTCGGCGCTCT TGTAGGCGGCAATGCCGCCGCCCACGCCGAGGACGATGCGTTTCCGATAGAGCCGCTGCATAGGCTTGCCTTAATAAGGAAATGGATGACATGCGCTTCG GCAAACGCGCCTCCCCAGGTCGTCTGCCGCGCAAAAAGGATGGGCTAAGATAGCACAGCGTCCGCACGGGAACAGCGGGCGGGCTCGATGGGGAAAGCGA
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DNA Sequence for Gene |
>Q049_05556
ATGAGCATCCGCGATTGGCCCGAAGCCGAACGGCCTCGGGAGAAGCTTCTGGAGCAGGGCGCGGCGGCCCTTTCCGATGCCGAGCTGTTGGCGATCTTCC TGCGCACGGGAGTGACCGGTTGCAGTGCGGTCGAGCTGTCGCGGCGGCTGTTGAGCGAGTTCGGCGGGCTGCGTGCCCTGCTCGAGGCGGACCTCGCCTC GTTCTGCGGCCATCTCGGGCTCGGCGTGGCCAAGTATGCGCAATTGCAGGCCGTGCTGGAGATGGGCCGGCGCCACCTGGCCGAGCGCCTGCGTCGCGAT TCGATACTGGAGAGCCCGCAGGCGGTGCGCGACTATCTCAAGGCGCGCCTGCGCCACGAGCAGCACGAGGTGTTCGCCTGCCTGTTCCTCGACACGAGGC ACCGGGTCCTGGCGTTCGAGGTGCTGTTCCAGGGCAGCATCGATGGCGCCAGCGTCTACCCGCGCCAGGTGGTCAAGCGCACCCTGGCGCACAACGCGGC GGCGCTGATCCTGACCCATAACCACCCTTCCGGCGACGCCCGTCCGAGTCTCGCCGACCGCCAGCTCACTGCGCGCCTCAAGGAAGCCCTGGCGCTCATC GACGTGCGGGTGCTCGACCACTTCATCATCGGCGACGGCGAGCCGCTGTCGCTGGCCGAATACGGTTGGCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGTTCGACGAAGGGCTCAGCCCAGGCGCCGCTCGATGCCCGCCAGCAGGCGCCGGCGGATCAGTCCGCTGACCGGGCGGATCGCCAACCAGTAGGGGGT GAAGCGCAGGCGGCTGGCGCGATCGGGGCAGAACACCCGGGTTTCCGTGTGCAGCAGGGTAGCGCCGGCGCGTCGATCAGCCGCTGATGGCGCTCGCTGA ACTGCCAATGCGGCAGGTAGAGACGGTCGAGATCCATCGCTGGGTTCTCCCGGGCGTGGCCTTCAGCGTTTCACGGCGACCCGCGAGAAATCCTGGCGAC CGAACGGATTGACCTGGTAGCCCTGCACCTCCTGGCGGGTCAGGGCGAAGGCGGTCGGGTGGGCCAGGGGCAGCCAGAGCGCCTGTTCGTGGATCAGTTT CTGCGCCTGGTGGTACAGGCCGGTGCGTTGTTCCTGGCTGCTGGCGGCCTTGCCGTCGGCAATCAGCTTGTCCAGGCCGGGGTCGCAATAGCGCGCGAAG
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Amino Acid Sequence |
>hypothetical protein
MSIRDWPEAERPREKLLEQGAAALSDAELLAIFLRTGVTGCSAVELSRRLLSEFGGLRALLEADLASFCGHLGLGVAKYAQLQAVLEMGRRHLAERLRRD SILESPQAVRDYLKARLRHEQHEVFACLFLDTRHRVLAFEVLFQGSIDGASVYPRQVVKRTLAHNAAALILTHNHPSGDARPSLADRQLTARLKEALALI DVRVLDHFIIGDGEPLSLAEYGWL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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