Strain | Pseudomonas aeruginosa BWHPSA044 adkfY-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AAAACAACAGAGCAGCCAGCAGATGACCCGCGGCTTCGAACCCTATCAGGAAACCAAGGGCGAGGAGTACATGAGCGAGCGCATGCGCGCGCACTTCACC GCGATCCTGAACAAATGGAAACAGGAGCTGATGGAAGAGGTCGACCGTACCGTGCATCACATGCAGGACGAAGCGGCCAACTTCCCCGATCCGGCCGACC GCGCCAGCCAGGAAGAAGAATTCAGCCTGGAACTGCGCGCCCGCGACCGCGAGCGCAAGCTGATCAAGAAGATCGACGAGACCCTGCAACTGATCGAAGA CGAAGAGTACGGCTGGTGCGACTCCTGCGGCGTCGAGATTGGCATCCGTCGCCTGGAGGCACGCCCCACCGCGACCCTCTGCATCGACTGCAAGACCCTC GCGGAAATCCGCGAGAAGCAACTCGGCTCCTGAGCCGGACCGACGGGGCGCCAAGGCGCCCCGTTTCGTTTCCGCCGTTCCCCGCCGCACCGCCCGCGCC
|
|
DNA Sequence for Gene |
>Q049_04931
ATGACCTCTTCCTATGTAGGCCGCTTCGCCCCGACGCCCAGCGGCTACCTGCACTTCGGTTCCCTGGTGGCGGCCGTCGCCTCCTACCTGGACGCGCGTG CCGTCGGCGGCCGCTGGCTGGTGCGCATGGAAGACCTCGACCCGCCCCGCGAAGTCCCGGGCGCCCAGCAGGCGATCCTGGAAACCCTGGAGCGCTACGG CTTCGAATGGGACGGCGCGGTGGAGCGGCAGAGCGAACGCTTCCCGGCCTACGCCGCAGTGGTCGAGCAACTGCTGCGCAGCGGCCTGGCCTACGCCTGC ACTTGCTCGCGCAAACAGCTTGAGGGATTCGCCGGGATCTACCCAGGCTTCTGCCGCGACGCCGGGCACGCCCGCGAGGACGCGGCGATCCGCCTGCGCG TGCCGGAGCTGGAATATCGCTTCGTCGACCGCGTGCAGGGCGAAGTCCGCCAGCATCTCGGCCGCGAGGTCGGCGATTTCGTCATCCAGCGCCGCGATGG CTTCTACGCCTACCAACTGGCGGTGGTGCTGGACGACGCCTGGCAGGGCATCACCGACATCGTCCGCGGCGCCGACCTGCTCGACTCGACCCCGCGCCAG CTTTACCTCCAGGAACTGCTGGGGTTGAGCCAGCCGCGCTACCTGCACGTGCCGCTGATCGTCCAGCCGGACGGGCACAAGCTCGGCAAGTCCTACCGCT CCCCGCCGCTGCCCGCCGAGCAGGCCGCCGCGCCGCTGACCCGCGCCCTGCGCGCGCTCGGCCAGCGGCCGCCGGCCGAACTGGCCCAGGCCAGCGCCAG CGAGGCGCTGGCCTGGGGCGTCGCGCACTGGGACGCCACGCGCATCCCGCGCTGCGCTACCCTTCCCGAGGAACGCCTGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCCGCCCGGCGGCTTGCCGGCACCCACCCGCAGCCTGTAGCCTGCCGGCCCAAGCATGAGGGAAGCGGCATGTACATCTACCGACTGGTCCTGCTCCTGG TCGTGGGCATCTATCTCTTTTCCCCCGCCATCATGGACTGGTGGATCGACCCCAACGGCGCCTGGTACCGCCCGTACCTGCTGTGGCTGATCCTCATCGT GGTCACTTTCATCCTGCAGAGCCAGCGCGATGCTGACGAGCTTTAGCCTGACCCAGCTGATCCTGATCAGCGTCGCCTACCTCTCCACCCTCTTCGGCAT CGCCTGGATCACCGAGCGCGGCTACGTGCCGCGCCGGCTGGTACGCCACCCGCTGGTCTACACCCTGTCGTTGGGCGTCTACGCCAGTGCCTGGGCGTTC TACGGCACGGTAGGCCTGGCCTACCAGTACGGCTACGGGTTCCTCGCCATCTACCTGGGGATTTCCGGGGCCTTCCTGCTCGCCCCGGTGCTGCTCTATC
|
|
Amino Acid Sequence |
>glutamyl-Q tRNA(Asp) ligase
MTSSYVGRFAPTPSGYLHFGSLVAAVASYLDARAVGGRWLVRMEDLDPPREVPGAQQAILETLERYGFEWDGAVERQSERFPAYAAVVEQLLRSGLAYAC TCSRKQLEGFAGIYPGFCRDAGHAREDAAIRLRVPELEYRFVDRVQGEVRQHLGREVGDFVIQRRDGFYAYQLAVVLDDAWQGITDIVRGADLLDSTPRQ LYLQELLGLSQPRYLHVPLIVQPDGHKLGKSYRSPPLPAEQAAAPLTRALRALGQRPPAELAQASASEALAWGVAHWDATRIPRCATLPEERL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|