Pseudomonas aeruginosa BWHPSA044, Q049_02444

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa BWHPSA044 adkfY-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCCCTGGCGCTGGCGATCCTGGCGCTGGCCGGCTGCTCGTATTTCTTCGCGCCGCGGGTCGAGTTGCAGCGGCTGACCCTGGATGTCGCCGCGCGCGCCA ACGACGACTCGCCGATCGCCGTGGACTTCGTCGCGGTGAAGGATGCGGAGCTGTTCAAGGAGCTGGCCGGACTGCCGGCCAGCCAGTGGTTCGCCAATCG CGAGCAGTACCGCCGCGACTACCGGCAGCAGTTCGCGGTATGGAGCCTGGAGCTGGTCCCGGGGCAGTTCATCGAGTCGGAGTCGTTCCCCTTGCGCGGC GACCGCGCAACTGGACTTTTGGTCTTCGCCGGCTATAACACACCCGGCGCGCACCGCTTGCGCCTCGACCAGCAGCAGCGCGTCTGGCTGCGTCTGGATA CCCGGGAAATGCGACTGGTCAACGATCCCGCCGCGCCCTAGCGAAGGGGCAGGCGAGCGACCGTCGTGCACGACAACGTAGGACGTCGAAGGGGAGTCGT
DNA Sequence for Gene
>Q049_02444
ATGAGTGTTCTGCCTGACGCGGTGTGCTGGCACGAAGGGATGCAACTGCTTCCCCAGCATTTCCAGTTGCAGGGATTGCGTGCCGAGGCGCTGGCGGCGC GCACCGGACAGGCCTGCAACCCTTGGTTCTGGGGCGTGACCGCCCTGGAACTGGACCCCTCGGCGTTGTGCGCCGGCCAAGTGCGGATCCTGCACCTCGA AGCGATCCTGCCCGACGGCCTGCCGGTGAGCGTGCAGGCTGGTGTCGACGCACCGCTGGAGTTCGACCTGGAGACTGCGCTGGCGGCCGCCGAAGGGCCG CTGCTGAACGTCCACCTGGCGGTCAGTCCGCTGTGGCGGGCGGGTCAGTTGCTGCCGCTGAAGGGCCGTCTGCAATCGCGGGTCGGCGCGCCGCTGCCGG ACCTGGCCAGCGGCGAGCACCCCGAGCCGATCACCGTCTGGCGAGCGTCGCTGCGGCTGGTCGGCGACGACGGCAAGGCCGACTCCGTGTGCCTGCCGTT GCTGCGCGTGGCGAAGGAGGGCGGCGCCTATGTCAGCCTGCCCTACGTCCCGCCGACGCCATTGGTGCTGCCGGAGTCGCCCCTGGGCAGGCGCGTGCAG TCGCTCTGCGCGCGGGCCCGGGAGAAGGCGCTGTTCCTCGGCGGGCGCCTGCGCCTGGCGCAGCAGGCGGGCAACCAGGACGACGCGGTGGAAGTCCGTC GCCAGCTCGCCGCGCTCTGGACCCGCCTGCCGGAGGTGGAAGGCCTGCTGGCAAGCCGCGCGGCCTCGCCGCTGGCCCTGCACGGCAGCCTGCTGGGCCT GGCCGGGGCCTGGGCGGCGCTCGATCCGCTGGCCGGCGTGCCGGCCTTCGAAGCGCTCGACTTCCTCGACCTGCGGCGTGGCTACGAGCCGCTGCTGGAC TGGCTGGAGCGCGCCATCGAGTCGATCCGCGCGGGCTACCGCTGCCTGCCGTTCGAGCAGGAGGAACAGGTATTTTCCGTGCGCCTGCCCGATCCGGCGC CGCGTCAGCGCCTGGTGGTCGGCCTGCGGATGCCCGCCGGCGCCGGCGAACAAGCGGCGGCTGACTGGCTGGAGCGCGCCATCGTCGCCTCCGACCCGCA CCTGCCGTTGCTCGCCCGGCAACGCATGAGCGGGCTGGCGCGGCAGCCGATGAATCGCCAGGAACAGGTGGCCTACAGCGTCGGCGACGACACCCGTTTG TTCGTCGTGCAGGGCGTCGGCGACTGGTTCGATGCCGGCCAGCCGCTGCGCATCGTCGCGCCGGTCAGCGGGGTCGCCAGCAGTCCCTGGCAGATCGTGC TGTTCGTCGCCGACGGCAGCGACAACACCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACAGGAAGGAGCCGCCAATGCCCGAAGGGAGTGCAGGGCCTTTTTCCCAGGCGTACCAGGAGCAGCCGCTCAGCACGGCATTCCGCCAGGCCTGGCAGGA ATGGCTGGAGGCCTGGGGCGCCCTCGACCGCGACGCCCAGGATGTGCCACGGATGGTCGAGCGCGCCCTCGAACTGTCCACCCGCATCACCCGGCGTCTG TGGCGCAGCGCCTTCGCCAGCGTCGGCGACGCGGCGGGCGTGCAGGTCAAGGCGATGGTCTATGCCTTCGTCGCCCTGGTCGACGAGACCCTGGTCTTCA GCGCCTGGCCGGGGCAGGGCGCCTGGCAGGAAAAACCGCTGGAGTCGCATCTCTACGGCAGTCGCCAGGCGGGCGAATACCTGCCGCTGGCGATCAAGCG CCTGCTCGACGAACGCGCCCCGGCCAGTCGCGACCTGGCCAACGTCTACCTGCAATGCCTGATCCTCGGCTTCCGCGGTCGCCTGCGCGGGCCGCGCGGC
Amino Acid Sequence
>type VI secretion protein
MSVLPDAVCWHEGMQLLPQHFQLQGLRAEALAARTGQACNPWFWGVTALELDPSALCAGQVRILHLEAILPDGLPVSVQAGVDAPLEFDLETALAAAEGP LLNVHLAVSPLWRAGQLLPLKGRLQSRVGAPLPDLASGEHPEPITVWRASLRLVGDDGKADSVCLPLLRVAKEGGAYVSLPYVPPTPLVLPESPLGRRVQ SLCARAREKALFLGGRLRLAQQAGNQDDAVEVRRQLAALWTRLPEVEGLLASRAASPLALHGSLLGLAGAWAALDPLAGVPAFEALDFLDLRRGYEPLLD WLERAIESIRAGYRCLPFEQEEQVFSVRLPDPAPRQRLVVGLRMPAGAGEQAAADWLERAIVASDPHLPLLARQRMSGLARQPMNRQEQVAYSVGDDTRL FVVQGVGDWFDAGQPLRIVAPVSGVASSPWQIVLFVADGSDNT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site