Strain | Pseudomonas aeruginosa BWHPSA045 adkfU-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGCTCGAACAACTACGGCCCGTACCACTTCCCGGAAAAGCTCATCCCACTGGTGATCCACAACGCCCTGGCCGGCAAGCCGCTGCCGATCTACGGCGACG GCCAGCAGATCCGCGACTGGCTCTACGTCAAGGACCATTGCAGCGCCATCCGCCGGGTCCTCGAAGCCGGGCAACTGGGCGAGACCTACAATGTCGGCGG CTGGAACGAAAAGGCCAACCTCGACGTGGTCGAGAGCCTCTGCGCCATCCTCGACCAGGAGCAGCCGCGCGCCGACGGCCGCAGCTATCGCGAGCAGATC ACCTTCGTCAAGGATCGTCCGGGCCATGATCGCCGCTACGCCATCGATGCCACGCGCCTGGAGCGCGAGCTGGGCTGGAAGCCGGCGGAAACCTTCGAGA CCGGCATCCGCAAGACCGTGCGCTGGTACCTGGACAACCAGGACTGGGTGGCCAACGTAACCAGCGGTGCCTACCGCGAGTGGGTGGGTAAGCAGTACGC
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DNA Sequence for Gene |
>Q050_05358
ATGAACCGGATCCTTCTCCTCGGCGCCAACGGCCAGGTCGGCTGGGAGCTGCAGCGCGCCCTGGCGCCGCTGGGCGAACTGCTGGTCTGTGACCGTCGGC GCGCCGATCTCGCCGACCCCGAAGGCCTGGCGCGACTGGTTCGCGCCGAGCGGCCGCAGTTCATCGTCAACGCCGGTGCCTACACCGCGGTGGACAAGGC CGAGAGCGATGCCGACAACGCCCGCCTGATCAATGCCCGCGCCGTCGCGGTACTGGCCGAGGAGGCCGCGGGCTGCGGCGCCTGGCTGGTGCATTACTCC ACCGACTACGTGTTCGACGGCGCGGGCAGCGCGCCTTTCGCCGAGGACGCGCCGACCGGCCCGCTGAGCGTCTACGGGCAGACCAAGCTGGAAGGCGAGC AGGCCATCCGCGCCAGCGGCTGCCGCCACCTGATCTTCCGCACCAGCTGGGTCTACGCCGCGCGCGGCGGAAACTTCGCCAAGACCATGCTGCGCCTGGC CGGGCAACGCGACGAACTCAAGGTCGTGGCCGACCAGTTCGGCGCGCCCACCAGCGCCGAGCTGATCGCCGACGTCACCGCCCAGGCCCTGCAGCGCCTG CGCTGGGATGCCGAGCTGGCAGCACGGGCCAGCGGCACCTACCACCTGGTCGCCAGCGGCGAGACGTCCTGGCACCTCTATGCGCGCTTCGTCATCGAAC AGGCGCTGGAGCGGGGCTGGGAGTTGCAGGCGACGCCGCAGCGGGTCCTGCCGATCGCCACCGAGGACTACCCGGTGCCGGCGAAGCGTCCGGCCAATTC GCGCCTCGACAACCGCAAGCTGCAACAGGTCTTCGGCCTGGTACTGCCAGACTGGCGCTACCATGCCGGACGCATGATCCAGGAACTGAGCGAGCAGGGA CCACTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AACGCAAGGGCATCATCCTCGCCGGAGGCTCGGGCACCCGCCTGCACCCGGCAACGCTGGCCATCTCCAAGCAGTTGCTGCCGGTGTACGACAAGCCGAT GATCTACTACCCGCTCAGTACCCTGATGCTGGCGGGCATCCGCGAGATACTGATCATCTCGACCCCACAGGACACCCCACGCTTCCAGCAGTTGCTGGGC GACGGTTCAAACTGGGGCCTGGACCTGCAATATGCCGTGCAACCGTCGCCGGACGGCCTGGCCCAGGCCTTCCTGATCGGCGAGTCGTTCATCGGCAACG ACCTCAGCGCGCTGGTCCTGGGCGACAACCTCTATTACGGCCACGACTTCCACGAGTTGCTCGGCAGCGCTTCGCAGCGCCAGACCGGCGCCAGCGTCTT CGCCTACCACGTGCTGGACCCGGAGCGCTACGGCGTGGTCGAGTTCGACCAGGGCGGCAAGGCCATCAGCCTGGAAGAGAAGCCACTGGAGCCGAAGTCG
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Amino Acid Sequence |
>dTDP-4-dehydrorhamnose reductase
MNRILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYTAVDKAESDADNARLINARAVAVLAEEAAGCGAWLVHYS TDYVFDGAGSAPFAEDAPTGPLSVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGAPTSAELIADVTAQALQRL RWDAELAARASGTYHLVASGETSWHLYARFVIEQALERGWELQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQVFGLVLPDWRYHAGRMIQELSEQG PL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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