Strain | Pseudomonas aeruginosa BWHPSA045 adkfU-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCCGTACACGTCCTTGTAACGCTGTTCCTCGCGCGCCAGCGCGGCACGCAATTCGTCTTTCGTCACGGGTGGTCCTGAGTCCAAAAAGAGCGGGCCCGA TAGCGACCAGGCTGGGCGGAAGCGGGGTCCGGCCAGCGCCGGTTGGGAGTCTAGTCGACCGCTACCGGCTGTAAATGGGCGCGGAATTATAACGTGGGCT CCGGGCTTGTCATACGGTGTCGGCCGACGGACGGCAGGACGGAAGTTCTTCGAGCGTCCCCTGGAAATGCGGCGAAGCCCCCATGGATCAAGGCCTGGCC GACGCGTCCGGGGTGTTCTCCGCCTTTCGTCGCGGCCTGCGCTAGTCGAATGCCAGCCATTGGCCATACCACTAAGGAACGATGGCGGCGCTTCCGGGAG CGGGCTACAAACCGGACTACAAGTCAAATAAAGAAGCCCCGCCGTCGCCCGTCCGACCCCAGGGTCATGACGCAACGCCCCGGAGGCCGGAGATTTACTC
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DNA Sequence for Gene |
>Q050_04429
ATGCAGCCCGCTCGTTCCCGCATCCTCTTCGTCTGCCTGTTGCAGAGCCTGGCCCTGGTTCTCCTGCTGGTCGGCGCCCGGCATGGCTGGCTGCCGCTGT ACCTGGCCCTGCCGCTCGGCGTGGTGCTGCTCTGGTTGCCCTGGCTGCTTCCCGGCAACCGCACGGCGGTGGCGACCGTCGGCGAGCCCGACATCGCCCG GCTGGCTCGCGACCTGTCCCATAACACCAGCCAGAACGCCTTGTCGGCCGCCGGCGTGGCGTTCTCGGTGAAGCGCCTGGCGGAGAAGCTGCAATCCCAG CTCGACGCCGCCGAACAGATCGTCGGCAGCGCCGAAGTGATGATCCACACCGAGCGCGCCACCTCCAATCTGGCGCGCCAGGCCATGGACGCCGCCACCC GGGCGCGCGCCGGCAGCGACGAAGGCCAGGTGCTGCTGGCCTCGACCATCGAGCGCATGCATCGGCTCAGCGAGCGGATGGGCGCCAGCCGCGAGGCGAT CGAGGCGCTGAACCAGCGCAGCGAGGACATCCAGCGGGTCACCCTGGTGATCCAGGGCATCGCCAGCCAGACCAACCTGCTGGCCCTCAACGCGGCCATC GAGGCGGCCCGCGCCGGCGAGCATGGGCGCGGCTTCGCGGTGGTTGCCGAAGAGGTGCGCGGCCTGGCCGGACGTACCGCCGAGGCCACCGAGGAAGTCG GCCAGATGGTCGCCGAGATCCAGCGCCAGACCAGCGAGGTGGTCGAGCAGATCCGCCAGCTTTCCGAAGAGTTGGGGGAAGGGGTCGGCCAGGTCGAGCT GACCGGTCGGCAACTGGAAGGCATTGCCGAACTGGCGGCCGGGGTGGAAAGCCAGATTACCGAGATCGCCCAGGGCGCCGAGATCAACCGCAGCCAACTC GCCAGCCTGTTCGCCGCGGTCGAGCAGGTGCGCGGCGACCTCAGCGCCAGCGAGGAACAGACCCTGCGCCTCGGCGAAGCTGCCAGCCAGTTGGAGAACC AGGCCGAGGTGATCAGCGAGCGCCTCGCCGAGGTCAGCCTGGACGCCTACCACCAGTCGGTCTACGACCTCGCCCGGGAGGGCGCGGCGGCTATCGCCGC TCGCTTCGAGGAGGACGTGCGCAGCGGGCGCATCGACCTCGACGACCTGTTCGACCGCAGCTACCAGCCGTTGCCCAATACCCAGCCGACCAAGTACCGG ACCCGCTTCGACAGCTACACCGACCAGGTCCTGCCGGGCATCCAGGAGCAGTTGCTGGAGCGCAACCGCAACCTGGTATTCGCCATCGCCTGTACCCCCG AAGGCTACGTGCCCACCCACAATCGCGCCTTCGCCCATCCGCCCAGCGGCGACCCGCAGACGGACGCGTTGCGCAGCCGCAGCAAGCGCCTGTTCAACGA CCGCACCGGGATTCGCTGCGGCAGCCACCAGCAGCCGCTGTTGCTACAGACCTACACCCGTGACACCGGCGAGCTGATGCACGATCTTTCGGTGCCGATC TTCATCCACGGCAAGCACTGGGGCGGCCTGCGCCTCGGCTACCGGCCGGAGGGCGCGGAGCCGGGCAAGGCGGCCGCGCCGGCGGCGCAGGGGCTGAGCC TGGCCTTGAACGGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGCTGTGGCGATCAGGCCGCCGGCCACGGCGCAGGCGAGCACCACTTGCCAGGGCGGCGTCTTCCAGGCGAGCAGGGCCAGCAGGGCGAAGAGCAGCA GGGCGAAGTCGGCCGGACGCAGGATGCCTTCGGTCCAGAGCGGCTGGTACAGCGCCGCCAGCAGCAGGCCGACCACCGCCGCGTTGACCCCGGCCAGCGT TGCCCGTACCCGGCGTTCGTGGCGCAGGCTTTCCCAGAATGGCAAGGCACCGGCGACCAGCAGGAACGACGGCAGGAAGATCGCCAGCAGGCACAGCAGC GCGCCGCTCCAGCCGTTCGGCGCCGGGCCCGAGGCTGCGCCGAGGAACGCGGCGAAGGTGAAGAGCGGGCCCGGTACCGCCTGGGCGGCCGCGTAGCCGG CGAGGAAGGTATCGCCGTCGACCCAGCCCTTGGGTACCACTTCCGCCTGCAGCAGCGGCAGCACCACATGGCCACCGCCGAATACCAGCGAGCCAGCCCG
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Amino Acid Sequence |
>methyl-accepting chemotaxis protein
MQPARSRILFVCLLQSLALVLLLVGARHGWLPLYLALPLGVVLLWLPWLLPGNRTAVATVGEPDIARLARDLSHNTSQNALSAAGVAFSVKRLAEKLQSQ LDAAEQIVGSAEVMIHTERATSNLARQAMDAATRARAGSDEGQVLLASTIERMHRLSERMGASREAIEALNQRSEDIQRVTLVIQGIASQTNLLALNAAI EAARAGEHGRGFAVVAEEVRGLAGRTAEATEEVGQMVAEIQRQTSEVVEQIRQLSEELGEGVGQVELTGRQLEGIAELAAGVESQITEIAQGAEINRSQL ASLFAAVEQVRGDLSASEEQTLRLGEAASQLENQAEVISERLAEVSLDAYHQSVYDLAREGAAAIAARFEEDVRSGRIDLDDLFDRSYQPLPNTQPTKYR TRFDSYTDQVLPGIQEQLLERNRNLVFAIACTPEGYVPTHNRAFAHPPSGDPQTDALRSRSKRLFNDRTGIRCGSHQQPLLLQTYTRDTGELMHDLSVPI FIHGKHWGGLRLGYRPEGAEPGKAAAPAAQGLSLALNG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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