Strain | Pseudomonas aeruginosa BWHPSA045 adkfU-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGCTGATGGTCGAACTGTTCCCGACCCGCATCCGCTATTCCTCGCTGTCCCTGCCGTACCACATCGGCAACGGCTGGTTCGGCGGCTTCCTGCCCACGG TCTCGTTCGCCCTGGTGGTGTACACCGGCGACATCTTCTACGGCCTCTGGTATCCGGTGCTGATCACCGGCGGTAGCCTGGTCTGCGCCTTGCTGTTCCT CCGCGAAACCCGCCATACCGACATCCACCGGTGAAATCGCGCCCCGTTCCCGGCATGGGGACGGGGCGCACATTCCCTCCGTGATGAGCCTGTCTTCTCA GAAAAGTCTGGCTTGCCAGTTTTCTTTCTTTCTCTTTCTGCCACACTTCTGGCGTCAAAAAACGCCTTTCCAGCGCCTACAATAGCGGGAAAACCCTATG GCGCTGCTTGCCGGTGCCGGGGACGGCCTATACAGTCCGCGCGATTGACGGGCCGTTGTGGCGGCAGGAACGAATCCGGACTCGAGTCTTGGGGAAAAAT
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DNA Sequence for Gene |
>Q050_03137
GTGAAGAACTGGACTGTTCGCCAGCGAATCCTGGCAAGTTTCGCCGTGATCATCGCGATCATGCTGCTGATGGCCGCTACTGCGTACGTGAAGATGTTGA CGGTGGAAAAGGGCGCCTACCGTGTCCAGGACGACGCCATGCCGGGGATGTACTTCATCACGCTGGTACGCAGTTCGTGGACCGACAACTACTTGCAGAC CCAGGAACTGTTCGGCATCACCGACGACCACGAGCTGAGCAAGGCCGAGGCCGACAGTATCCTCGCCAGCGAGGAGCGCCTGGACCAGCAGATCGCCTCC TACCAGAAGACCATGAACCCGGACGAGGCCCGCGACCACGAGTTGCTCGCCGGTTTCCAGGCCGTGCGCAAGAACTACCTGGAGCAGCACGACAAGGTGC TCGAGCTTTACCGCGAGAAGCGCTTCGAGGAAGCCGGCAAGCTCGTCGCCGGCCCGTTGACCGAGCACTGGCGCGAGGGCCGCAAGTACCTCAACGAGAT GATCGAGCTGAACAAGGACATCGCCGACCGCGCCTCGGACAACATCGTAAACGCGGTGGACGATGCCGAACTGAGCATGCTGGTGACCCTGCTGCTGGCG GTGGTGGTAGCCGGCATCTGCGGGTTCCTGCTGTTGCGGGCGATCACCCAGCCGATCCAGAAGATCGTCCGCAGCCTCGACCTGATGGCCGGTGGCGACC TCACCGCACGCCTGAACCTCGGCCGGCGTGACGAATTCGGCGCCATCGAGACCGGTTTCAACGGCATGGCCGAAGAGCTCAAGGGCCTGGTGTCGCAGGC CCAGCGTTCTTCGGTGCAGGTCACCACCTCGGTCACCGAGATCGCCGCGACCTCCAAGCAGCAGCAGGCCACCGCCACCGAAACCGCCGCGACCACCACG GAGATCGGCGCCACTTCTCGCGAGATCGCCGCCACCTCGCGCGACCTGGTGCGGACCATGAGCGAAGTCTCCGGCGCCGCCGAGCAGACGTCGACCCTGG CCGGTTCCGGCCAGTTGGGCCTGGCGCGCATGGAGGAAACCATGCACCACGTGATGGGTGCGGCCGACCTGGTCAACGCCAAGCTGGCGATCCTCAACGA GAAGGCCGGCAACATCAACCAGGTGGTCACCACCATCGTCAAGGTCGCCGACCAGACCAACCTGCTCTCGCTGAACGCCGCCATCGAGGCGGAGAAAGCC GGCGAGTACGGCCGCGGGTTCGCCGTGGTGGCCACCGAGGTGCGCCGGCTGGCGGACCAGACCGCGGTCGCCACCTACGACATCGAGCAGATGGTGCGCG AGATCCAGTCGGCGGTATCGGCCGGGGTGATGGGCATGGACAAGTTCTCCGAGGAGGTCCGCCGCGGTATCGCCGAGGTCGGCCAGGTCGGCGAGCAACT GTCGCAGATCATCCAGCAGGTGCAGGCGCTGGCGCCGCGGGTGCAGATGGTCAACGAGGGTATGCAGGCCCAGGCTACCGGTGCCGAGCAGATCAACCAG GCGCTGGTGCAACTGGGCGAGGCCACCGGGCAGACCGTGGAGTCGCTGCGCCAGGCCAGCTTCGCCATCGATGAGCTGAACCTGGTGGCGAACGGGCTGC GCAACGGCGTATCCCGCTTCAAAGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCTGTGACCGTGTCCCGCTCCACCGGCGATCATCGACGCACCAGCAAGCTGTTCCTGCTGTTCCGCATGGAAGGCGACCGCTATGCCCTGGATGCCCGC GAAGTGGTCGAAGTGCTGCCGCTGCTGCGCCTGAAGCGCATTCCGGAGGCGCCGGAATGGGTCGCCGGGGTGTTCTCCCATCGCGGCGTCCTGGTCCCGG TGCTCGACCTCTGCGCAATGGCCTTCGGCCGCGCGGCGCTGGCCCGCACCAGCACGCGCATCGTGCTGGTCGAATACCGCGCCCGCCAGGACCGGGAGCC GGTCTGGCTCGGACTGATCCTCGAACAGGCCACCGATACCCTGCGCTGCGAACCGTCGGCGTTCCGCGACTATGGCCTGGACAACGGCGGGGCCCGCTAT CTCGGTCCGGTCTATGAAGGACCACGGGGACTGGTGCAATGGGTGCGGGTCGAGGCATTGCTGCCCGACGAAGTGCGCGCCCTGCTGTTCCCGCCGGAGT
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Amino Acid Sequence |
>chemotaxis protein
MKNWTVRQRILASFAVIIAIMLLMAATAYVKMLTVEKGAYRVQDDAMPGMYFITLVRSSWTDNYLQTQELFGITDDHELSKAEADSILASEERLDQQIAS YQKTMNPDEARDHELLAGFQAVRKNYLEQHDKVLELYREKRFEEAGKLVAGPLTEHWREGRKYLNEMIELNKDIADRASDNIVNAVDDAELSMLVTLLLA VVVAGICGFLLLRAITQPIQKIVRSLDLMAGGDLTARLNLGRRDEFGAIETGFNGMAEELKGLVSQAQRSSVQVTTSVTEIAATSKQQQATATETAATTT EIGATSREIAATSRDLVRTMSEVSGAAEQTSTLAGSGQLGLARMEETMHHVMGAADLVNAKLAILNEKAGNINQVVTTIVKVADQTNLLSLNAAIEAEKA GEYGRGFAVVATEVRRLADQTAVATYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGIAEVGQVGEQLSQIIQQVQALAPRVQMVNEGMQAQATGAEQINQ ALVQLGEATGQTVESLRQASFAIDELNLVANGLRNGVSRFKV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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