Strain | Pseudomonas aeruginosa BWHPSA045 adkfU-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGCGACGCGCTGGACAAGGTCTATCGCGACAAGCGGGTAAGCCTGCAGCGGGACTTCTCGCCGTCCTTCAGCGTGCCGGTGGAGCGCGGCGCGCTGCTGG AACTGCTCGGCAACCTGCTGGAGAACGCCTATCGCCTGTGCCTGGGCCGGGTCCGCGTGGGCGCCCGGCTGGGGCCGGGTTACTCGGAGCTGTGGGTCGA GGACGACGGTCCCGGAGTGCCTGCCGAACAGCGCGCACGAATCATCCGCCGCGGCGAGCGCGCCGATACCCAGCACCCGGGGCAGGGCATCGGCCTGGCC GTGGCGCTGGACATCATCGAGAGCTACGACGGCGAACTGAGCCTGGACGATTCCGAGCTGGGCGGCGCCTGCTTCCGCATACGTTTCGCTACAGTCTGAG ACTTGGCGGCCGTTACCTACGTCTGAGGTGTTTCCGCGCTACGCTGAAGTCTGTTCGGCTGGCGCAGTTCCTTTGACGCAGGTACCGGGGATTCGAGCGG
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DNA Sequence for Gene |
>Q050_01999
ATGTTCAGTGGCAAAACCGACGACAGGGGCTTGTGGGCGGGCATCCAGGCCGGTGTGCTGTTCTTTCTCGCCGCCCTGGCCTGCATCTACCTGTCGCGCC AGCCTGCCACCATCGCGGCGATCTGGCTGCCCAACGCGATCCTCACCGCCGCCCTGCTGCGCGCGCCGCTGCGCCAGTGGCCGGCGATCCTGCTCTGCTC CGCCGTGGCCAACCTGGCGGCCAACCGCCTGTATGGCGACAGCCTGTGGATGAGCGCGGCGTTCCTGCCGGCCAACCTGAGCGAAGCGATCTTCGCCGCG ATGCTGTTACGCATCAACCGGGTGCGCGAGGACTTCGAGTTCAACCTGCATTCGGCGGTTCGCGTGCTCTGGGCCGGCGCGCTGATCCCGCCCTTGCTCG GTGCCTCGGTGGGCGCGGTGCTGGTCAGCGTCTTCGGCATGGGGCGTTTCCCGGAAATGTGGGCGCGTTGGTACGTGGGCGATGCGATGGGCATGCTCGC GCTGCTGCCGTTATGCATGGCCAGCAACCTGGCGGCCTGGCGTCACGCTCTGTCGGGGCGGGCGGGAGTGGACAACGCGATGCTCCTGCTGGTGACCCTG GTGATCAGCTTCGTGGCCCTGACTCGCCTGCCCTACGCCTTCATCTACGTGCTCCTGCCGCTGCTGGTGGCCGCCGCCAGCACCAGCGTGTTCGGCACCG CGCTGATCGGTTGCCTGAACACCTGTTTCATCGCCGTGCTGATCGCCCTCGGCGTGTTCGTCCCCGAGTCGTCCCAGCAGCGTTTCGGCGAGCCGCTGCT GTACCTGCCGATGGCCTTGACCCTCATTCCCGCCTTCCTGGTCTCGGTGATCATGGAGCGCAGCCGCCGCGAGCAGCACCAGGTGGCCATCGGCGAGGCG CAGTTCCGCGGCGCTATGGAATTCTCGGCTATCGGCATGGCCCTGGTGTCGCTGGAGGGGCGGCTGTTCAAGGTCAACGAGGCGCTGTGCCGGATGCTCG GCTATTCCGCCGAACGCCTGGGAGAGCTGTCGTTCCAGGAGATCACCTATGTGGACGACCTGGAACTGGACCTCGACCTGGTGCGCGACCTGCTCGCCGG GCGTATCAACTCCTACCAGATGGAGAAGCGCTACCTGCGCCAGGACGGCGAAACCTTCTGGGCGCGCATCAGCGTGTCGCTGGTGCGCGACGAGGAGGGA GTCGCCCAGTACTTCGTCACCCAGGTGGAGGATATCGACAGTCGCAAGCGTGCCGAGCTGGAGCGCGAGCGCCTCGCCGAACGGATCAAGCTGGCCACCG ACGCCGGGCAGATCGGCATCTGGGAGTGGGACCTGGCGCGCAACCGCCTGCACTGGGATTTCCGCATGTTCGACCTGTACGGCATCCGCAGCGGTCCCGG GGAGACCACGGTGGAGCAGTGGAAGGCGAGCCTGCATGCCGAGGATCACGACCGCGTGCTGCGCGAGCTGGAGCGCGCCGTTAGCGGGTTGCAGAAATTC GACTGCGAGTTCCGTATCGTCCGCCCCAACCGCGAGGTTCGCCACCTGCGGGCGATCGCCACGCTGACGCGCGACGAGGACAATCGGCCGGTGCGGATGA TCGGCATCAACAGCGACATCACCGAGATCCGCACCCTGGCGGAAACCCTGCACGAGGAAAAGGAACGCCTGCAGGTGACCCTGTATTCCATCGGCGATGC CGTGTTGACCACCGACGCCGGCGGCCGCGTGACCTTCATGAACCCGGTGGCCGAGGCGATGACCGGCTGGACCTTGCAGGACGCCATCGGCGCGCCCCAC GAACTGGTCTTCAACGTGCTCGACAGCGACACCGGCGAGGCCCTGGAAAGCCCGGTGCGACGCTGCCTGCAGAACACCCGGGTGTTCTACCTGGAGGACG GCGCCACGCTGATCAGCCGCAAGGGCGAGCAGCACGATATCCAGAATTGCGCGGCGCCGGTGCGCACCCGCGATGGCGAGATCATCGGCACCGTGCTGGT GTTCCAGAACGTCACCAAGGCCCGGGCGATGCAGCGCGAGCTGAGCTATCACGCCTCCCACGATGCCCTCACCGGGCTGTTCAACCGCACCAAGTTCGAG GAGGAGCTGCAACGCGCCCTGGCCAACGCCCAGGAGCGGGCGACCCAGCATGCGCTGTGCTTCATCGACCTCGACCGCTTCAAGGTGGTCAACGATTCCG CCGGGCACGCGGCGGGCGACATGCTGCTGCGCGAGCTGAGCCGGATTCTCGCCGACCGCACCCGCGCCTCCGACACCCTGGCGCGGCTGGGCGGCGATGA GTTCGGCCTGCTGCTGTTCGATTGCGACCTGGCGGAGGCGGAGCAGGTGGCGAGCAAGCTCATCGAGCAGATCTGCTCGGTGCGCTTCCCCTGGGAAGGG CGGCTCTACGACGTGGGCGCGAGCATCGGTATCACCGCCCTTACCGCCACCTCGCGCAGCACCAGCGAACTGATGAGCCAGGCCGACGTGGCCTGCTACG CGGCCAAGCATGCCGGGCGCAACCGGGTTTCGGTGTACCAGTTCGGCCATGAGGAAGTGGAGCGCCAGCACCGCGACATACTCCTCGCCAGCGGGCTGCG CGAGGCCCTGGAGAACGACCGCTTCCAGTTGCAGGCGCAGGAGATCGTCCCGGTCGGCCCCCGCCGCGACGGCGACCGGCACTACGAGCTGCTGCTGCGA CTGTACGATCCGGATGGCCAGATGACTCCGCCGGGCGCCTTCATCCCGGCCGCCGAGCGCTTCAACCTGATGGCCAGCATCGACCGCTGGGTGATCAACG AGGCGCTGATCAACTTCGGCGCGCGGATCGCCGCGGTGGAGGGCCTGAGCATCGGCATCAACCTGTCCGGCAACTCGCTCAACGACCCGCTGTTCCTGCC TTACCTGCTGGATCGCATCGAACACTCGCCGCTGAGGCCGGAGCGCCTGTACTTCGAGCTGACCGAGACGGCGTTGATGAACCAGTTGTCGGTGGCTTCG CGGATCGTCGCCAAGCTGCGCGACCTCGGCTGCAAGGTGGCGCTGGACGACTTCGGCTCCGGCCTGAGTTCCTTCAATTACCTGAAGAATTTTGTCGTCG ACGTGATCAAGATCGACGGCAGCTTCGTCCGCAACCTGGACAAGAGCCCGGTGGACCAGGCCATCGTCGACTCCATCAACCAGATCGCCCACCGCCTGGG CGCGGTGACCGTGGCCGAGTTCGTCGAGAGCCGGGAAATCCTCGATCACCTGGCGCGCCTCGGGGTGGATTTCGCCCAGGGCTACGCGGTCGGGCGGCCG CAGCCGTTCGCCACGGTGCTCGACCAACTGCGCAGCGGGCTTCGTCGCCAGGAGCTGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCTTCAGGCTTCCGCCTGGTGCCGGTACGCGCCAGGGGTGAGGCCGGTCCACTTCTTGAACGCGCGATGGAAGGCCGAGGGCTCGGAAAAGCCGAGCTGC TCGGCGATGTCCTGGATCGATAGCTCGTCCCGACCCAGGTGGTAGATCGCCAGGTCGCGGCGCAGGTGGTCCTTGAGTTGCTGGAAGCTGCCGCCTTCCT CGCGCAGGTGGCGTCGCAGGGTCTGCGAACTCATGTGCAGTTGGCGGGCGACCTGGTCGAGGTCTGGCCAGCGCCGGCAGTCGCGGCCGAGCAGGCGGCG GATCTGGCTGGTCAGGCTGTCGCCGCCGTCCGGGCGCGCCAGCAGGTCGGCGGGAGAGTGCTGGAGGAACTGCTTGAGGGTGCGTTCGTCCTGCAGCAGC GGCATGCCCAGGTAGCGGGCGGCGAACAGCAGGCTGGTGCAGCCGGCGGAAAACCGCCGGGGGCAGGGAAACAGCAGGTCGTACTCGGCCTGGTGGTCCG
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Amino Acid Sequence |
>diguanylate cyclase
MFSGKTDDRGLWAGIQAGVLFFLAALACIYLSRQPATIAAIWLPNAILTAALLRAPLRQWPAILLCSAVANLAANRLYGDSLWMSAAFLPANLSEAIFAA MLLRINRVREDFEFNLHSAVRVLWAGALIPPLLGASVGAVLVSVFGMGRFPEMWARWYVGDAMGMLALLPLCMASNLAAWRHALSGRAGVDNAMLLLVTL VISFVALTRLPYAFIYVLLPLLVAAASTSVFGTALIGCLNTCFIAVLIALGVFVPESSQQRFGEPLLYLPMALTLIPAFLVSVIMERSRREQHQVAIGEA QFRGAMEFSAIGMALVSLEGRLFKVNEALCRMLGYSAERLGELSFQEITYVDDLELDLDLVRDLLAGRINSYQMEKRYLRQDGETFWARISVSLVRDEEG VAQYFVTQVEDIDSRKRAELERERLAERIKLATDAGQIGIWEWDLARNRLHWDFRMFDLYGIRSGPGETTVEQWKASLHAEDHDRVLRELERAVSGLQKF DCEFRIVRPNREVRHLRAIATLTRDEDNRPVRMIGINSDITEIRTLAETLHEEKERLQVTLYSIGDAVLTTDAGGRVTFMNPVAEAMTGWTLQDAIGAPH ELVFNVLDSDTGEALESPVRRCLQNTRVFYLEDGATLISRKGEQHDIQNCAAPVRTRDGEIIGTVLVFQNVTKARAMQRELSYHASHDALTGLFNRTKFE EELQRALANAQERATQHALCFIDLDRFKVVNDSAGHAAGDMLLRELSRILADRTRASDTLARLGGDEFGLLLFDCDLAEAEQVASKLIEQICSVRFPWEG RLYDVGASIGITALTATSRSTSELMSQADVACYAAKHAGRNRVSVYQFGHEEVERQHRDILLASGLREALENDRFQLQAQEIVPVGPRRDGDRHYELLLR LYDPDGQMTPPGAFIPAAERFNLMASIDRWVINEALINFGARIAAVEGLSIGINLSGNSLNDPLFLPYLLDRIEHSPLRPERLYFELTETALMNQLSVAS RIVAKLRDLGCKVALDDFGSGLSSFNYLKNFVVDVIKIDGSFVRNLDKSPVDQAIVDSINQIAHRLGAVTVAEFVESREILDHLARLGVDFAQGYAVGRP QPFATVLDQLRSGLRRQELG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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