Strain | Pseudomonas aeruginosa BWHPSA043 adkgk-supercont1.7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCGGGCTACTACTGGAACGTCGGGCTCGAGCTGTTCAACGAACAGCCGACCCGCCCCGGCCAGGACAACACCATCGACTACTATGCCGAGAATGCCCAT AGCCTCCAGTACCAGGAGGACGGCAGCCTCGACTACGAGATGACCGCGGTGAAGCTGGAGCACCAGAAAGCCACGGACATCACTTTCGTCACCACCCCCG ACCTGCTGCTCTTCCGTGGCAACGTGCAACCCTGGCACATCCAGAGCGCCCGCGCCGAAGTCGGACCGAAAGGCAAGGAGGTCGAACTCATCGACGACGT GCGCGTCGCACGTACCGATGCCAAGGGCCAACCAAGCATCCTGACCACCACTCGGCTGACCGTATTCCCCGACAAGAATTATGCACAGACCGAGCAAGCC GTTAAAATCGACGCGGCCAATGGAGTGACGACGGCTGTTGGAATGAAAGCGTATCTGAAAGACAGCCGGATGCACCTGCTGTCCAACGTAAGAGGTCAGC
|
|
DNA Sequence for Gene |
>Q048_05204
ATGAGGTTCGTTAATACCCTCCCCCTTATTTTCGGTCTGACTGCCGCCCTCGGCAGCTCCATGGCCTTGGCCCTGCCTTCGGACCGCGAACAACCGATCC GCGTCCAGGCCGACAGCGCCGAACTGGACGACAAGCAGGGCGTCGCGGTCTACCGCGGCGACGTCGTGGTGACCCAGGGCAGCACCAAGCTGACCGGCAA CACCGTGACCCTGAAGCAGGACAAGAACGGCGACATCGAGGTCGTGACCTCGGTCGGCAAGCCTGCCTACTATGAGCAGAAACCCGCTCCGGACAAGGAC GTGACCAAGGCCTATGGCCTGACCATCCAGTACTTCGTCACGCAGAACCGGGTCGTGCTGATCGACCAGGCCAAGGTGATCCAGGAAGGCAACACCTTCG AAGGCGAGAAGATCGTCTATGACACCCAGCGCCAGATCGTCAACGCGGGTCGTGCCACCGGCTCCCAGGTGACCAGCCCGCGCCCGCGCATCGACATGGT CATCCAGCCGAAGAAAAAGGCCCAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TGGCAACGCTCAAAGCCCAGCACCTGGCCAAAAGCTATAAAGGCCGGCAAGTCGTCCGCGACGTCAGCATGTCCATCGATAGCGGGCAGATCGTCGGCCT GCTCGGTCCGAACGGTGCCGGCAAGACCACCTGCTTCTACATGATCGTCGGCCTGGTCCAGGCCGACCAGGGCGTGGTCCGCATCGACGAGCAGAACGTC ACCCACCTGCCGATGCACGGGCGCGCCCGGGCCGGCATCGGCTACCTGCCGCAGGAAGCCTCGATCTTCCGCAAGTTGTCGGTATCCGACAACATCATGG CGATCCTCGAGACCCGCAGCGACCTCGATCGCAACGGTCGCAAGGAAGCCCTGGAAGGCCTGCTGCAGGAATTCCACATCCACCACATCCGCGACAACCT CGGCATGAGCCTGTCCGGCGGCGAACGACGCCGGGTGGAAATCGCCCGCGCCCTGGCCAGCGCGCCGAAATTCATCCTCCTCGACGAGCCCTTCGCCGGC
|
|
Amino Acid Sequence |
>organic solvent tolerance protein OstA
MRFVNTLPLIFGLTAALGSSMALALPSDREQPIRVQADSAELDDKQGVAVYRGDVVVTQGSTKLTGNTVTLKQDKNGDIEVVTSVGKPAYYEQKPAPDKD VTKAYGLTIQYFVTQNRVVLIDQAKVIQEGNTFEGEKIVYDTQRQIVNAGRATGSQVTSPRPRIDMVIQPKKKAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|