Pseudomonas aeruginosa BWHPSA043, Q048_01939
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF03480
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | NF037995 | NCBIFAM: TRAP transporter substrate-binding protein DctP | - | - | 39 | 299 | 3.8E-45 |
| PANTHER | PTHR33376 | - | IPR018389 | TRAP transporter solute receptor DctP | 19 | 315 | 3.6E-66 |
| Coils | Coil | Coil | - | - | 255 | 275 | - |
| CDD | cd13677 | PBP2_TRAP_SBP_like_6 | - | - | 22 | 325 | 0.0 |
| Pfam | PF03480 | Bacterial extracellular solute-binding protein, family 7 | IPR018389 | TRAP transporter solute receptor DctP | 33 | 309 | 1.5E-81 |
| Gene3D | G3DSA:3.40.190.170 | - | IPR038404 | TRAP transporter solute receptor DctP superfamily | 20 | 332 | 8.4E-108 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.