Strain | Pseudomonas aeruginosa BWHPSA043 adkgk-supercont1.16, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGGAGGTGGTCGACGACGCGGTGCGCCAGCTGATCGACGACATGTTCGAAACCATGTACGAAGCCCCGGGCATCGGCCTCGCCGCGACCCAGGTGAACGT GCACAAGCGCATCGTGGTCATGGACCTCAGCGAAGACAAGTCCGAGCCGAGGGTATTCATCAACCCCGAGTTCGAACCGCTGACCGAGGAAATGGACCAG TACCAGGAAGGCTGCCTGTCGGTACCCGGCTTCTACGAGAACGTGGACCGACCGCAGAAGGTCCGGATCAAGGCCCTCGACCGCGACGGCAACCCCTTCG AGGAAGTCGCCGAAGGCCTGCTGGCGGTATGCATCCAGCACGAATGCGACCACCTCAACGGCAAGCTGTTCGTCGACTACCTGTCCACCCTCAAGCGCGA CCGCATCCGCAAGAAGCTGGAAAAGCAGCATCGACAGCAGGCGTGACCCCATCCCCCAAAGGCTTGCCCCGGCAAGCCTTTTTCTTTTAGCGAGCCCCGC
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DNA Sequence for Gene |
>Q048_06232
|fmt
ATGAGCCAAGCATTGCGCATCGTCTTCGCCGGAACCCCGGAATTCGCCGCCGAGCATCTCAAGGCCCTGCTCGACACCCCACATCGGATCGTCGCCGTCT ACACCCAGCCCGACCGACCGGCCGGCCGCGGGCAGAAACTGATGCCCAGCGCGGTGAAGAGCCTGGCCCTGGAGCATGGCCTACCGGTCATGCAGCCGCA GAGCCTGCGCAATACCGAGGCCCAGGCGGAGCTGGCGGCGCGGCGCGCGGACCTGATGGTGGTGGTCGCCTATGGCCTGATCCTGCCCCAGGCGGTACTC GATATCCCGCGCCTGGGCTGCATCAACAGCCACGCCTCGCTGCTGCCGCGCTGGCGCGGCGCCGCGCCGATCCAGCGCGCGGTGGAAGCCGGCGACGCGG AGAGCGGCGTCACCGTGATGCAGATGGAAGCAGGGCTCGACACCGGCCCGATGCTGCTCAAGGTGAGCACGCCGATTTCCGCCGCGGACACCGGCGGCAG CCTGCACGACCGGCTCGCCGCGCTCGGCCCGAAAGCGGTGGTCGAAGCCATCGCCGGCCTGGCCGCCGGCACCCTGCATGGCGAGGTCCAGGACGACGCC CTGGCCACCTACGCGCACAAGCTGAACAAGGACGAGGCACGCCTCGACTGGAGCCGTCCGGCCGTCGAACTGGAGCGCCAGGTCCGCGCCTTCACCCCCT GGCCGGTCTGCCACACCAGCCTCGCCGATGCGCCGCTGAAAGTCCTCGGTGCCAGCCTGGGGCAGGGCAGCGGGGCGCCCGGAACCATCCTCGAGGCCAG CCGCGACGGCCTGCTGGTCGCCTGCGGCGAAGGCGCCCTGCGCCTGACCCGCCTGCAAGTGCCGGGCGGCAAGCCACTGGCCTTCGCCGACCTCTACAAC AGCCGTCGCGAGCAATTCGCCACCGGCCAGGTGCTCGGCCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACCCGCGTCTCGCCGCCTGCCAGGCACTGGCCGCAGTGCTCGCCGGACGCGCCTCGCTGTCTGGCGCGTTGCCGCCGCAACTGGACAAGGTCGCCCCGCG CGATCGCGGCCTGACCCAGGAGCTGGCCTTCGGCGCGGCGCGCTGGCAACCGCGTCTGCAGGCCCTGGCCGCGCGCCTGTTGCAGAAGCCGTTCAAGGCC GCCGACACCGATATCCACGCCCTGCTGCTGATCGGCCTCTACCAGTTGCTCTACACGCGGATTCCGCCGCACGCCGCGATCGGCGAGACCGTCGGCTGCG CCGACAAGCTGAAGAAGGGCTGGGCCAAGGGCGTGCTCAACGCCGTGCTGCGCCGCGCGCAGCGCGAAGGCGAGACGCTGCTGGCCGAGGTCGACCGCGA TCCCTCGGCGCGCCTGGGCCATCCGCGCTGGCTGCTGAAAGCGCTCAAGCAGGCCTGGCCGGAGCAACTCGACGCGCTCTGCGCGGCGAACAACGCACAC
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Amino Acid Sequence |
>methionyl-tRNA formyltransferase
MSQALRIVFAGTPEFAAEHLKALLDTPHRIVAVYTQPDRPAGRGQKLMPSAVKSLALEHGLPVMQPQSLRNTEAQAELAARRADLMVVVAYGLILPQAVL DIPRLGCINSHASLLPRWRGAAPIQRAVEAGDAESGVTVMQMEAGLDTGPMLLKVSTPISAADTGGSLHDRLAALGPKAVVEAIAGLAAGTLHGEVQDDA LATYAHKLNKDEARLDWSRPAVELERQVRAFTPWPVCHTSLADAPLKVLGASLGQGSGAPGTILEASRDGLLVACGEGALRLTRLQVPGGKPLAFADLYN SRREQFATGQVLGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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