Pseudomonas aeruginosa BWHPSA043, Q048_00600

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa BWHPSA043 adkgk-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTTTGCGCAGTAGTGTCCAGGCCAGTATTTTCAAGGGCTGTGGGCTGTTATTGGGGATGTTTCTTGGTTTTCATTGTGCAACTTCTTGCACAATCGCTAT TACGCTCTAAATCAGCTGTTGGTCCGCTTGGAAGGCCTATGTTTCGAGGCTCTCCAGAGGAATCCACTGTTGCCTGCCTTATTTTTTATAAATTGTTAAC TACCTGTTTTGGTAGGGTTTTCCAAATGGCCATCAATGTCGTTATGATGGCTATAGCCAAGCCGTAAAGGGCATGGACGCAGACGCCTGACGTTTGGCTG AAAATCTTTCATTGATTCGTATCAATGAATAGGAAAATTCCCAAAGAGGGAATGTCCTGTTGCTTGCCAGTTTTTATGTTGTTTTCATGGAAAAGGCAAA GAGCTTTTCAGGCTATTGGGATTTTCGTTCGGTTTTTATGCCAACTAGTTGAATTGTTAAGATATTCATTGGCGCACATGGTGTGCATTGAAGGGTTAGG
DNA Sequence for Gene
>Q048_00600
ATGACCTATTCGAGCAAGCTCTCCTCGCATTATCTGGAACTCGCGGAACAGCCGATTTCAAAGGATGTCTTTGCGGGTGAGGATGTGCGTTTTTCCAGCG AATACGAGGCGCTGGAAAATGAGCTGGGCAAGGCGCTCTCGCTCCATGAGAACGGCCAGACCGACTGGTTGAAAATCCTGGAAAACAGCGAAGCGCTGCT TCGTGCCCAATCCAAGGACCTGCGTGTTGCAGCCTGGTTGACCTGGGCCCTCTACCAACGGGAATCCTTTCCCGGTTTGCTGGCCGGACTGGGATTGCTG GAACGTCTGTGCAGCCGGCATTGGGTCGAGATCCATCCGCTCAAGGCGCGCACTCGCGCCGCGGCCATTGCCTGGCTGGTGCCCCGGCTGGAGCAGGCGC TGAACGAGAACGTACCGATCAAGGAGCAACTCCCCCTGTTCCGGCGTCTCGCCGAGCACCTGGAAAAACTCGATACCGCGCTGACCGCGCAACTGGGCGA CGACGCGCCCTTGTTGCTGCCGATCAGCCGACGCCTTTCGGGCATGCTCCAGCGCGCCGCCGACAACCAGCCCGAACCTGGCGTGGTCGGCGCCGTGGTG GCCCAGGTCAAGCAGGCGGCCAGCCAGTTGCTGGCGCCGGGTGCGCCCATCGACAACGAGCGCGACGCCCACAAGGCCATGCGCGCCCAGCAGGAGGCCG CACGCCCCCTGTGCGCCTGGTGGCTGAAGCAGAAAGCCACCGATCTGCGCGCGCTGCGCCTCAACCGAACGATGCTCTGGCTGCCCATCGAGTCCATGCC CGAGCGCAATGCCGAACAGGTCACCGCGTTAAGGGGGGTGCCGGCGGACAAGCTGAAAAGCTACCAGGAGCGTTTCGCCCAGGGCCTGTACGCCGATCTC CTGGTGGAGCTGGAGGCGAGCCTGGCACGGGCGCCGTTCTGGTTCGACGGCCAGCGCCTGGTCTGGGAGTGCCTGCAAGGGCTCAACGCCGAGCAGGCGA TGCGGGAAGTCGAAATGCATTTCGCCTTGCTCCTGCAGCGTCTGCCGGGGCTGGTGGAGCTGCGTTTCCACGACGGCAGCGCATTCGCCGATGCGGCCAC CCGCGGCTGGATCAGCGCCCATGTCATGCCCCATCTCCAGAACGACAGTGCGCCGCGCAAGGTCGAGACCGTGGCCCTGCAGGCCGAATGGGACGTCGCC CTGGACGAGGTCCAGCCGGTGTTGCGCAAGGACGGCCTGAAGGCGGCGGTACAGGTGTTGAAGCAGGGCATGAAGCGCGCCCACGGCGGGCGCGCCCGGT TCTTCTGGCAACTGAGCCTCGCGCGACTGTGCTTCCTGGCGAAGAAGTACGAGCTGGCCAAGACCCAGCTGGAGAGCCTCGACCATCAGTTGCACGAATC GGGATTGCACGCCTGGGAGCCCGATCTGGCGCTGGATGTACTGCACCTGCTGCATAGCTGCTGCGAGCTGTTGCCGCAGAACCACGCCGTGCGAGAACGC AAGGAAGACATTTATCGCAGGCTGTGCCACCTCGATCTCGAGGTGGTGCTCGAATAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCTTCGCGCCCTCAATTCTCAAGGAGAAAAAGCCATGGCCAAAGAAGGCTCGGTAGCCCCAAAGGAACGCATCAACGTCACCTTCAAGCCCGCCACCGG CGGTGCCCAGGAAGAAATCGAACTGCCGTTGAAGCTGCTGGCGATCGGCGATTACACCCAGCGCGCGGATGAGCGCAAGGTGGAGGACCGCAAGCCGATC GGCATCGACAAGATGACCTTCGACGAGGTCCTGGCCAAGCAGGAGCTGGGGCTGACGCTGAGCGTACCCAATCGTCTCCAGGAGGAGGGCGGCAGCGACG AGCTGGCGGTGGGACTGCAGATCAACTCGATGAAGGACTTCAACCCGGCCAGCGTCGTCGAGCAGGTGCCCGAGCTGAAGAAGCTGATGGAGTTGCGCGA TGCGCTGGTGGCCCTCAAGGGCCCGCTGGGTAACGCCCCGGCGTTCCGCAAGGCCATCGAAAGCGTACTCGCCGACGACGAGTCCCGTAGCCGCGTGCTG
Amino Acid Sequence
>type VI secretion protein ImpA
MTYSSKLSSHYLELAEQPISKDVFAGEDVRFSSEYEALENELGKALSLHENGQTDWLKILENSEALLRAQSKDLRVAAWLTWALYQRESFPGLLAGLGLL ERLCSRHWVEIHPLKARTRAAAIAWLVPRLEQALNENVPIKEQLPLFRRLAEHLEKLDTALTAQLGDDAPLLLPISRRLSGMLQRAADNQPEPGVVGAVV AQVKQAASQLLAPGAPIDNERDAHKAMRAQQEAARPLCAWWLKQKATDLRALRLNRTMLWLPIESMPERNAEQVTALRGVPADKLKSYQERFAQGLYADL LVELEASLARAPFWFDGQRLVWECLQGLNAEQAMREVEMHFALLLQRLPGLVELRFHDGSAFADAATRGWISAHVMPHLQNDSAPRKVETVALQAEWDVA LDEVQPVLRKDGLKAAVQVLKQGMKRAHGGRARFFWQLSLARLCFLAKKYELAKTQLESLDHQLHESGLHAWEPDLALDVLHLLHSCCELLPQNHAVRER KEDIYRRLCHLDLEVVLE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site