Pseudomonas aeruginosa BWHPSA042, Q047_04830
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA042 adkfZ-supercont1.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCAATTGGGCAACCGCGTCGCACCTTCCACTCCGGAGGGTATCCTCAGCGTCATCAAGGAAGTGAAGAAAGGCGGTTGCGTAGGGATTCCCGCCGACCC CGAGCCCGCGCGTACCGCTGGGCTCTTCGTGCCCTACCTGGGCACCACTGCCTTGATCAGCAAGTTCGTCCCGCAGTTGCTTTCACGCGGCAAGGCGCGT GGAGTGTTCTTCCATGCGGTGCGCCTGCCCGATGGTAGCGGTTACAAGGTGATCCTCGAAGCGGCTCCGGCGGACATGTACGACAAGGACCTGGAAGTGT CTGTAGCAGCCATGAGCCGCGAGTTGGCGAAGTATGTACGAGCCTATCCCAGCCAGTACATGTGGAGCATGAAGCGCTTCAAGAACCGCCCGGATGGCGA GAAAAAATGGTATTGAGGAAAGGGCGTCGGAAGACGCCTTTTTCATATCCGGGTACTATGCTCAGCTCTGCCGCCTCCTCCGCAGGTCCCGAGGGACTCG
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| DNA Sequence for Gene |
>Q047_04830
ATGGATAATCAACGACAATACCCACGAACCCCGCTCAAGTGCCGAATCCGTATCAGTCACCCGTTATTTGGCGAGCTGATGGCGCAGACACGCGACCTCT CCGACACCGGGGTCTATGTCAAACACCCGGATCTGACCCAGCTCCCAACAGGCAGTGTCGTTACTGGCCAGGTACAGGATCTGCCGATCGACGCGCCGAT CCTGCAGATGGAAGTCGTGCGAGTCGATGCGGAAGGCGTCGGCCTGCGCTTTCTCAGCGAAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGGTGATGTTCCACGTGGAACCCCAGGCATGAGCCACTGATCACAGAGTGGGCGAAACCGCTGCCGGTTATCGGCTAGAATGCGCGCCGCTCGGCATGG TGCCGGGCATGGGTTCCCTCACCCCATCGCGCAAAAAGGACAGCACATGTCAGCCTCTTCTCCGGCGGCCTGGCGCGGCACCCTGGCCGGCCTGATCGCC TTCCACATCTTCATCATCATCGCCAGCAACTACCTGGTGCAGTTGCCGATCACCCTGTTTGGCTGGCACACCACCTGGGGCGCCTTCAGCTTTCCGTTCA TCTTCCTGGCTACCGACCTCACCGTGCGCTTGCTGGGCAAGGGCCCTGCCCGGCTGGTCATCGCCCGGGTCATGATCCCGGCGTTGATCGCCTCCTACGT GGTCTCGGTGTTGTTCCAGGAAGCGGCGTTCCGTGGTTTCTCCGCGCTGCTGGAGTTCAACACCTTCGTCGCACGGATATCCCTGGCAAGCTTCCTCGCC
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| Amino Acid Sequence |
>pilus assembly protein PilZ
MDNQRQYPRTPLKCRIRISHPLFGELMAQTRDLSDTGVYVKHPDLTQLPTGSVVTGQVQDLPIDAPILQMEVVRVDAEGVGLRFLSEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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