Pseudomonas aeruginosa BWHPSA041, Q046_06419
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA041 adkgd-supercont1.8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGAGGAAAGGGCGTCGGAAGACGCCTTTTTCATATCCGGGTACTATGCTCAGCTCTGCCGCCTCCTCCGCAGGTCCCGAGGGACTCGATGGATAATCAAC GACAATACCCACGAACCCCGCTCAAGTGCCGAATCCGTATCAGTCACCCGCTATTTGGCGAGCTGATGGCGCAGACACGCGACCTGTCCGACACCGGGGT CTATGTCAAACACCCGGAGCTGACCCAGCTCCCAACAGGCAGTGTCGTTACTGGCCAGGTACAGGACCTGCCGATCGACGCGCCGATCCTGCAGATGGAA GTCGTGCGAGTCGATGCGGAAGGCGTCGGCCTGCGCTTTCTCAGCGAAGCGTGAACGGTGGTGTTCCACGTGGAACCCCAGGCATGAGCCACTGATCACA GAGTGGGCGAAACCGCTGCCGGTTATCGGCTAGAATGCGCGCCGCTCGGCATGGTGCCGGGCATGGGTTCCCTCACCCCATCGCGCAAAAAGGACAGTAC
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| DNA Sequence for Gene |
>Q046_06419
ATGTCAGCCTCTTCTCCGGCGGCCTGGCGCGGCACCCTGGCCGGCCTGATCGCCTTCCACATCTTCATCATCATCGCCAGCAACTACCTGGTGCAGTTGC CGATCACCCTGTTTGGCTGGCACACCACCTGGGGCGCCTTCAGCTTTCCGTTCATCTTCCTGGCTACCGACCTCACCGTGCGCCTGCTGGGCAAGGGCCC TGCCCGGCTGGTCATCGCCCGGGTCATGATCCCGGCGTTGATCGCCTCCTACGTGGTCTCGGTGTTATTCCAGGAAGCGGCGTTCCGTGGTTTCTCTGCG CTGCTCGAGTTCAACACCTTCGTCGCCCGGATCTCCCTGGCAAGCTTCCTCGCCTATGTGCTCGGACAGATCCTCGATATCCAGGTATTCGACCGCCTCC GTCGTTCCCGGCACTGGTGGACCGCGCCAGTCGCCTCGACCATCCTCGGCAACCTGCTGGACACCTTCACCTTTTTCTTCGTGGCGTTCTGGCGCAGCGA CAATCCGTTCATGGCGCAGCACTGGGTGGAAATCGCCACGGTGGACTACGGAGTGAAGCTGAGCATCAGCCTTCTGCTGTTCGTGCCGCTCTACGGCATG CTACTCAACGGCATCCTGAAGATGCTGCCGGAGCGGCCGCAGAGCAACGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCTCATCGAGGCAATCTGGAGGAAGGGCGCAACGGTCACGGCCGTTGCGCCCTTCTTCATTCAGGAGGTGGTAGCCCGGTGCGCGGCCGTGAGCAGCGT CAGGGCATCGCCGCCGAGCGTGACCAGGATGTGCGCCACGCGCTGAATGGGAACGCCCTGCCCTGTCCGCACTTCGATCCTTTCCAAGGCATGGAGGGGG CCGAGGAGAGCCCTGAGGCGCTCCTGTACGGATTCGAGCATCTCATTGGCGGAGGCGTTCCGGTGAACGTAGAGAATCGCTTGCTCGTATGGGTATTCGA CATAGGACGGGACTGAACGCTCTTGCTTCGACATGTTGGCTCCGGAAAAGTAGTTGAAGTCAGGTGTCGCGTTCGGGCTTGGACCGAAGCGATGAGTCGA AGCTAGAGGGCCGGCAGCGGTCGCTCAATGGGGTGTTGGGCGTTCGGGATGCAGGCTACATCGTTGACAGAAGTTGCCTACGAATGTGTGGAACAGGTCT
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| Amino Acid Sequence |
>membrane protein
MSASSPAAWRGTLAGLIAFHIFIIIASNYLVQLPITLFGWHTTWGAFSFPFIFLATDLTVRLLGKGPARLVIARVMIPALIASYVVSVLFQEAAFRGFSA LLEFNTFVARISLASFLAYVLGQILDIQVFDRLRRSRHWWTAPVASTILGNLLDTFTFFFVAFWRSDNPFMAQHWVEIATVDYGVKLSISLLLFVPLYGM LLNGILKMLPERPQSNA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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