Pseudomonas aeruginosa BWHPSA040, Q045_03412
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA040 adkfQ-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AATGCGCGGTACTGCTCTGCGAAGGCGAGGTGCTGCTGGCCGAACACTTTTCCCTGCGCGCGCCCCCGGAAGCGGAGGCGCCGCTCAAGCTGCGCGAGCA TCTGGAGCAGATCGAACGGGACCTGCTGCTCGCCTGCCTGCGCAGGAACGCTGGCAACCAGACCCTCGCCGCGCGCGAACTGGGTCTGCCGCGACGAACC CTGATCTATCGCATGGGACGCCTGAACATTCATTTCGGCGATCCCCGGACCTGAAGCCCATGATCGAGATTTCCTTCCAACCAGCCCAGCCGGGCGCGCG CCTGGAGCGCGGCGTCCGCGGCCCTTCCATGGAGACTCCCTGATGCCTGTTCGTCACTGGCCCGCCGTGCTTCTGGCCCTGGCCGTCCTCTGCGGCCTCG CCGGTTGCAGCGGCAACTACAAATTCAACGATGGCGACTATCGCCCGCTTGGCGATCCGCAGGCGGTCAATCGCGGCAAGTGACCGCAAGGAGCGATCTC
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| DNA Sequence for Gene |
>Q045_03412
ATGGAACTGGTATTGGAAATGCTCAGCGCCAAGCAATTCGTACCGACGGAGCTATGCAGCAAGACCTTCGGCAGGAGCGGCGGCCTCATCGGCCGGGGCG GTGAGTGCGATTGGGCGATTCCCGATCGCAAGCGGCACCTGTCCAAGCAGCATGCGCGGGTCAGCTATCGCAACGGCGCGTTCTACCTGACCGACACCAG CAGCAACGGCATCCGCGCCGGCAACGGCAGCCGCCTGCCGCATGGCGAGCCGCAGCGCATCGAGCAGGACAGCGTCTTCCTGCTCGGCGACTTCGAGATC CGCGCGCGGTTGCTGCGCGAGCCCGACGAGCTCGCCATGGACGTCGGGCGGCCGCAGCCGGCGGGCAGCATCATTCCGGACGATGCCTTCCTGGCCCTCG ATCCGTTGCAGGCGCTCGACCAGGACGGTGCAGATGCCTACGAACTCGACGACCTGAGCGCGATCGCCCAGCCCAGCCAGGAGGCCGGGGCGCGTGCGGA CTACGCGCGGATCGACATGGAAAGCCTGGTCGTACCGGAGCTGGTGCCCGCCCCGGCGGCTCCGCAGGAACCCGTGGAAAGTCCGCGTCCGGGTCGCGAC GAAGCCTTCTGGCAGCGTTTCGGCCAGGCCCTGGGAATGGACCTCGAAGGCCTCGACGGCGCTGCGCGCGAAGCGCTGGCGATCAACGCCGCCGGTTTGC TGCGGCAGTGCATCGGCGGCTTGCAGCAGAGCCTGCGGACCCGCAGCGAACTGAAGAACGAACTGCGCCTGTCGCTGAGCACGTTGCGCGATACCGGCAA GAATCCCTTGCGCTTCAGCGCCGATGCCAGCGAGGCGCTGGGGCATCTGCTACGGGATGGCAAGCCTGGCCAGTTGAGTGGCGAACAGGCCGTCGCACGC AGTTTCCGCGACCTCCAGGCGCACCAGGTGGCGCTGCTCGGCGCCAGCCGGGCGGCGGTGCGCGCGACCCTCGAGCATTTCTCGCCGCAGCAGCTGGCCC TGCGTTTCGAGCGCGACGGTCGCCGGCCGTTGCTGGCCACCTCGGGCAGCCGCTGGCGTGCCTACGGTCGCTACCACCAGTCGCTATGCCAGGACGACGA TTGGAGCGAGCGTCTGTTGGCGCGTGATTTCGCCCAGGCCTACGAAGAGCAGGTTCGCCTGATTTCCACCCTCTACACCGAGCACCAAGGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCCATGTCTCGTCGCCCGATCCCGCCAGCCAGGGCGCTGGCCATGCTCGCCGTCCTGGCGCTGCTGGCCGGCTGTTCCACGCTGTCGCCGTATTCCAG ACTGACCAAGCTCGACCTCGCCCTGAGCGCCGGCGAGCGGGTCAATCCCGACCTCAATGGCCGGCCGTCGCCGGTGGTAGTGCGGCTGTTCGAGCTGAAG CACCCGGTGGCGTTCGAGAACGCCGACTTCTTCAGCCTCTACGAACGTCCCAAGGAGACCCTGGACCCCGACCTGGTGACCAGCGAGGAGCTGGAGCTGC GTCCCGGCGAGCGGGTCGAACTCAAGCTCAGCGTGGGGGAGGGGAGCCGCTACGTGGGCGTGCTCGCCGCCTACCGCGATCTCGGCGAGGCAAGCTGGCG CTACGTGGTGCCGGTCACGGCGAAAGAGCTGACCCGGGTAGAGCTGAAGCTGGGCCAGAAGGGCATCCTGAATGCCGGCGAACTGCTCGGCAAGGCGGGT
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| Amino Acid Sequence |
>type VI secretion system FHA domain-containing protein
MELVLEMLSAKQFVPTELCSKTFGRSGGLIGRGGECDWAIPDRKRHLSKQHARVSYRNGAFYLTDTSSNGIRAGNGSRLPHGEPQRIEQDSVFLLGDFEI RARLLREPDELAMDVGRPQPAGSIIPDDAFLALDPLQALDQDGADAYELDDLSAIAQPSQEAGARADYARIDMESLVVPELVPAPAAPQEPVESPRPGRD EAFWQRFGQALGMDLEGLDGAAREALAINAAGLLRQCIGGLQQSLRTRSELKNELRLSLSTLRDTGKNPLRFSADASEALGHLLRDGKPGQLSGEQAVAR SFRDLQAHQVALLGASRAAVRATLEHFSPQQLALRFERDGRRPLLATSGSRWRAYGRYHQSLCQDDDWSERLLARDFAQAYEEQVRLISTLYTEHQG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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