Pseudomonas aeruginosa BWHPSA040, Q045_00088

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa BWHPSA040 adkfQ-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTCCGGGTCCGGCAGGACCCAGTCGTTGTCCGGGCCCCGACCGATGGTCAGCTGTCCCTGGTCCAGTACCTTTTCCGAACACTGACCGGGGGTCAGCTT GTGGTAGCTGGTGATGGTCAATCGCAGCGGCATTGCTACTCCTTGCATTGCCAGCGCCCGGCTCTTCCAGGCGCTCACCCCCGTGCCCGAGGGATTTCGG TTCGCATCCAGGCTGGCCCGACGGCTTTCCGGCGTTTCGTCGCCTCGGGAAGACACATCGGGTGATACCGGATTATAAAAGACTAATCCTACGTCTTTTA AAGATTTGTCCGATCTGCGGTGTCATGCAACTAGTGGCGTTGTGCCTTCCTTGACAAGCCTTGCGGCATGCCACAAGAATTTTGCCAACCTTTCGAGTCA TCCGATATTCATCAATGGCTCCTACAAGATCCGACGGAGTGGATCTTACAAGCGAAGGTGAGGGCCGCGCAGCGGCTTCGATGATAGGGAGATCGTCACC
DNA Sequence for Gene
>Q045_00088
GTGCTGGATGTACCCGTTTTGCTGGCTGCCGTATCCCCGGACTCGCCCTGTGGCGACGATCTGGAGTACGACGCCGCGTTCCTCGAACTCGAACGCATCG CCCAGGGCCAACCCGAGCGCCAGATGGGCGATGCCGTGCTGCCCGCCGAACCGCCGGAGTGGCCGCGCGTACGCGCGCTGGCCAGCGAACTGTTCGGCCG TAGCAAGGACCTGCGGGTAGCCAACCTGCTGCTGCAGAGCAACGTCGCCCTCGACGGCCTGGACGGGCTCGCCGACGGCCTGCTGCTGGTCCGCGAGCTG CTCGGCCAGTACTGGGACGGCGTCTATCCGCTGCTCGACGCCGATGACGACAACGACCCCACCTTCCGTATCAACGCCCTCACCGGCCTGGTCGCCGAAC CGTTGCTGCAACTGGTCTGGGCGATCCCGCTGGTGCGCTCGCGGGCGTTCGGCCCGGTCAACCTGCGCGCCGCGCTGAACGCCGCCGGGCTACAACGCTT CGCCAGCGAGACCCTGAGTCCCGAGCAGATCGCCGGCGCCTTCGCCGATGCCGACGCCGATGCGCTGGCCGCCACCCGGCGCGCCCTGGAAGGCGCCCAG GAACATGCCCTGGCCATCGAGAGCGGCGTCGCCGAACGGGTCGGCTCGGCCCAGGGACTCGACCTCGGTCCCCTTCGTCAACTGCTGCGCCAGGCCCTCC AGGTGTTCGACCTGTACGGCCCGCAGGGCGCCGGCGAGCCCTTGGCGCCGGGCGCCGAAGCGGCCGCCGACGAGCAGGGGGGCGCCGCGCCTGTCGCAGC CGTCGCCGCGCCGGCACCGCGAGCCAGCGGCGAGATCGCCAACCGCGAAGACGTCCTGCGCCAGCTCGACCGCCTGCTCGAGTATTACGTTCGCCACGAG CCGTCGAGCCCGGTGCCGGTGCTGCTCAAGCGCGCCAAGACACTGGTGACGGCCGACTTCGCCGAAATCGTGAGGAATCTCATCCCCGATGGGATTTCCC AGTTCGAAACCCTGCGAGGCCCGGAAAGCGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCCTAGCGGCCGTCCGGGCCAACGCTGCAAGCCGCCGGGGCGATTCCGACGGCGCTAACAACCGCCGTCGCGCGAGGGAGAAACAAGATGGGAAGCACT ACCAGCAGTCAGAAGTTCATCGCCAGGAACCGGGCGCCACGCGTGCAGATCGAGTACGACGTGGAGTTGTACGGTGCCGAGAAGAAGGTCCAGCTGCCCT TCGTCATGGGCGTCATGGCCGACCTCGCCGGCAAGCCCGCCGAACCCCAGGCGGCGGTCGCCGACCGCAAGTTCCTGGAGATCGACGTGGACAACTTCGA TGCCCGGCTGAAGGCGATGAAGCCGCGGGTGGCCTTCAACGTACCGAACGTGCTGACCGGCGAAGGCAACCTGAGCCTGGACATCACCTTCGAGAGCATG GACGACTTCAGCCCCGCCGCGGTGGCGCGCAAGGTCGATTCGCTGAACAAGCTGCTCGAGGCGCGTACCCAGCTGGCCAACCTGCTGACCTACATGGACG
Amino Acid Sequence
>type VI secretion protein ImpA
MLDVPVLLAAVSPDSPCGDDLEYDAAFLELERIAQGQPERQMGDAVLPAEPPEWPRVRALASELFGRSKDLRVANLLLQSNVALDGLDGLADGLLLVREL LGQYWDGVYPLLDADDDNDPTFRINALTGLVAEPLLQLVWAIPLVRSRAFGPVNLRAALNAAGLQRFASETLSPEQIAGAFADADADALAATRRALEGAQ EHALAIESGVAERVGSAQGLDLGPLRQLLRQALQVFDLYGPQGAGEPLAPGAEAAADEQGGAAPVAAVAAPAPRASGEIANREDVLRQLDRLLEYYVRHE PSSPVPVLLKRAKTLVTADFAEIVRNLIPDGISQFETLRGPESE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site