Strain | Pseudomonas aeruginosa BWHPSA039 adkgf-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATCGCCCAGCACAGCAACGGCCTGCTCAGCCGCTGGCGGCCGACCCTGCTGGAAGATCATCCGTTGCCCGGTCCGCCGGGACGCGGCGCGATCTTCGTGC GCTTTGGCGAAGGCGCCGACGCGCTGGTGGTAGTGATGATGCATCTCGCTCTCGGCGCTCGCACCCGCACCCGCCAGCTCGCCTATATCCGCGAGCTGAT CGGCGACTACCGCCACCAGGTGCTGATGGGCGACATGAACACCCACGCCGTCGATCTTCTGGAAAACTCGCCCCTGCGCGACCTCGGCCTGATGGCGCCG CAGGTCGAGGCGACGTTTCCCAGCTGGCGGCCGCAGCGCAATCTCGATCACATCCTGCTCAGTTCCGATCTCGCTCTCGAGCGGGTCGACGTGCTCGACC AGCCGATCTCCGACCATCTGCCGGTATCGGTGGAGATTCGCCTGCCGGACAACCTGCGCGACAAGGCCTTGGTCGTGCGCGGGGATGCCGGGAGTCCGCC
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DNA Sequence for Gene |
>Q044_06314
ATGAGTCGCGACGACGTCCAGCGCTGGAAAGACAAGTACCTGGAGAACATCGAGCAGCAGGAGCGCCTGCAACGGCGCTGGGATGCCCGCATCGACCTGC TGCGTCGCGGCCTGGTGCGTAGCAGTCTGGCGGCCGAAGGCAGCGACAAGGCGGTCGACCAGTGCATGAAGGAGCTGCGCGAGATCCTCCGTCGCGACGA CATGGACGCCGGCCTGTCGGGCCTGATTCCGCGCCTGGAAAAGGCCGTGCTCGACTCCGAACAGCGCCGCCAGCAACGCACCCAGCAGAACATCGATGCT CTCGGCGAACTGGCCCAGCAGTTGCTGGCCCTGGACCTGCCGCGGGAACTGCGCAAGCCGCTGAAGCAGTTCGCCCGCGATATCGAGGAGCGCGCCCGGC AGTCGCGCGAGATTCCGATCCTGCTCAGCGAGCTGAGCAGGCTGCAACGCCAGGCGCTGGCCGAGCGCAAGGGCGGCGATGCCGAAGACGGTCGCCCGAG CCTGTTGCAACGCCTGTTCGGCGGCAAGGAGTCGGAAACCGCCGCGGAGCCGAGCGCATCGGTGCCGTCCGTTGTGGCGGCAAGCAATACACCGATCCAA CCGGCGGCGGCCGCGCCGTCCCTGCCGGTCGCCGAGCACGACGAGGCGCCAGGCGGTCCGCCGCAGCCGTTGCCCGCCTGCACGGTCGCCGCCATCGAAA GCGCGCCAGCGGGTTGGGTCGGGGTCGCCGAGCGTGGCGAGCCGAACCAGATCCTGCTGGATGAGGCCCGGGAAATCTGGCTCGACAGCCTGCCGCTACC GGCCGGCCTGAGCTTTAGCGAGACGCTGGAAGAAGCGGGTGCGGAGCCGTCGCCCGCAATGCCGGCGGACGTTGAAAGCGCGCCCGAAGCTCCGGCCACC CCTGTGGATAACCTCGACGGGCAGGCGGTAGACGAGGCCTACGAACTGCCGCCGCCGATACCGGAGCCCGGCTACAGCGCGGTGGCGCCGCACATCGAGG CCAGCCTGCTGCGGCTGCTCGACGGCCTGTCCCTGCCGAGCAGCCACCAGCCCCAGGCCGAGGCGCTGCGGGAGCGGATCGATGGCAGCCTGAACTGGTA TGAGCTGGTGCCGGTACTCGACGACCTGGCGGTGCTGGTGCTGTCCCTGGCGGACAGTGGCCAGCGCGACTTCGAGGAATACCTGCGGCAACTCAACGAG CGCCTGGAAAGCTTCCTCGGCCACCTGGGCGACGCCCACGCCGGCTATACCGACGTGCTGGACAACGCGCGCGGCTTCGACCAATCGCTGCGTGAGCAGG TCAGTGGCCTGCAGGCCAGCGTGCAGCAGGCGACCGACCTGAACAGCCTCAAGCTGGCGGTGGACAGCCGGCTGAACGGCCTGCTTGCCTCCATGGACGA ACACCAGCGCGAACAGGCCGAGCACGAACAGGAGGTGTCCGGCCGCCTGCAGGCGCTGATGGAGCGGGTCAACAGCATGGAGCAGGATGCCAAGGCGTTC CACAGCCACCTGGAGGACCAGCGACAGAAAGCCCTGACCGATCCGCTGACCGGCCTGCCCAACCGCGCGGCGCTCAGCGAGCGCCTGGAACAGGAAGTGG CGCGCCGGCACCGGGACGGCGGCGATCTGCTGCTGGCGGTGCTGGACATCGACCACTTCAAGCGGATCAACGACGACTTCGGCCACCTGGCCGGGGACAA GGTGCTGAAGATCATTGCCGGCGAATTGCGCAAACGGTTGCGCCAGGCCGATTTCATCGCCCGTTTCGGCGGCGAGGAGTTCGTCGTCCTGCTCCCGGCC ACGTCCCTGGAAGCCGGCCGGCAACTGCTCGAACGGCTGCGCGCGGCGATCGCCGCCTGTCCGTTCCATTTCAAGGGCGAGCCCCTGAGCATCACCTGTT CCGCCGGCATCACCGCGTTCGAAGGCAACGAGGCCGGCGAAGCGGTTTTCGAGCGTGCCGACCAGGCGCTGTATCGAGCCAAGCGCGCCGGCCGGGACCG CCTGGAAGTGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGGGCGACCAGCGCACATTCCGACGACTCGGGACGGGCTCGCCTGCAGGTGTTGCCGCGGCTCGCTAGAATGGTCCCGCCCGGTAGAATGACCGGCTGTC CCGCTCTGGAAACTCCCATGGATATGTTCGGCGTCGCCGTCCTGATCTTTCTGGTCACCGACCCCTTCGGCAACATCGCCGTGTTCCTCGCCGCGCTGAA AGGCGTCGCACCTGGGCGCCGCCTGCGCGTGGCGTTTCGCGAGCTGGCCTTCGCCCTGGGTCTGCTGCTGCTCTTCCTCACCCTCGGCGAGCACATCCTC AGCGGCCTCGGCCTGTCCCGCGAGGCGACCGGGATCGCGGGTGGCATCATCCTGTTCGTGATCGCCATGCGCCTGATCTTCCCGTCGCCCCAAGGGCTGC TCGGCGAAGTGCCCGACGGCGAGCCGCTGCTGGTACCCCTGGCCACCCCGGCGGTGGCCGGGCCCTCGGCGCTGGCGATGCTGATCACCCTGCGCACCAC
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Amino Acid Sequence |
>diguanylate cyclase
MSRDDVQRWKDKYLENIEQQERLQRRWDARIDLLRRGLVRSSLAAEGSDKAVDQCMKELREILRRDDMDAGLSGLIPRLEKAVLDSEQRRQQRTQQNIDA LGELAQQLLALDLPRELRKPLKQFARDIEERARQSREIPILLSELSRLQRQALAERKGGDAEDGRPSLLQRLFGGKESETAAEPSASVPSVVAASNTPIQ PAAAAPSLPVAEHDEAPGGPPQPLPACTVAAIESAPAGWVGVAERGEPNQILLDEAREIWLDSLPLPAGLSFSETLEEAGAEPSPAMPADVESAPEAPAT PVDNLDGQAVDEAYELPPPIPEPGYSAVAPHIEASLLRLLDGLSLPSSHQPQAEALRERIDGSLNWYELVPVLDDLAVLVLSLADSGQRDFEEYLRQLNE RLESFLGHLGDAHAGYTDVLDNARGFDQSLREQVSGLQASVQQATDLNSLKLAVDSRLNGLLASMDEHQREQAEHEQEVSGRLQALMERVNSMEQDAKAF HSHLEDQRQKALTDPLTGLPNRAALSERLEQEVARRHRDGGDLLLAVLDIDHFKRINDDFGHLAGDKVLKIIAGELRKRLRQADFIARFGGEEFVVLLPA TSLEAGRQLLERLRAAIAACPFHFKGEPLSITCSAGITAFEGNEAGEAVFERADQALYRAKRAGRDRLEVA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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