Strain | Pseudomonas aeruginosa BWHPSA039 adkgf-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGCCTCGATTTCGCCCGCCAGCCGCACCTCGACGCGGCCACCCGCCAGGCCCGCGTCGACCAGGCGATCGCCGCGGTCGGCCTGGAGCACGCCCGTGCC CGCTACCCGGCGCAACTCTCCGGCGGCATGGCCCAGCGCACCGCGCTGGCCCGCTGCCTGGCGCGGCAGCCGAAGGTGCTGCTGCTCGACGAACCTTTCG GCGCGCTGGACGAAGTGACCCGCGCCGACATGCAGCAGCTGCTGCTGCGGGCGATCCACGAGCGCGGCACCGCCGTGGTCCTGATCACCCACGATATCGA CGAGGCCCTGCTGCTCTCCGAACGCATCCTGCTACTGGGTGACAGCCCGGCGCGGACCCTCGGCGAGTGGCGCATCGACCTGCCGCAGCCACGCGCGGAG CTGGTCGAGGAACTGGGCGCGTTGCGCATCGAGATCCTGAAAACCCTACGGCGGGCGAGCCGCACCCATGCCCATCCCATCGCTCAGCCGGAGGCCTCCC
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DNA Sequence for Gene |
>Q044_02926
ATGTGCCTGGACGACCCGACCCATTCCCGACGTGACATCCTCAAGCTCGCCGCGCTGCTCAGCGCTGCCGGCGCGTTGCCGCTGCTGAGCAGCCTGCAGG CGCGTGCCGCCGCCGAACCCGACGCGCCGGTGCGCATCGGCTACCTGCCGATCACCGACGCCACGCCCTTGCTGGTGGCCCATGCCAACGGCCTGTTCGA GGCCGAGGGCATCCAGGCCGAACGGCCCGTGCTGTTGCGTAGCTGGGCGCAGGTGATCGAGGCGTTCATCTCCGGCCAGGTCAACGTCATCCACCTGCTG TCGCCGATGACCGTCTGGGCCCGCTACGGCAGCAAGGTGCCGGCCAAGGTGGTGGCCTGGAACCACGTCGGCGGCTCGGGGCTCACGGTGGCTCCGGAGA TCGCCGACGTGCGCCAGCTCGGCGGCAAGAGCGTGGCGATCCCGTTCTGGTACTCGATCCACAACGTGGTGTTGCAGCAACTGCTGCGCGACAACGGCCT GCGCGCGGTGAGCCGTGCGGTGGGCGCGGCGCTGGCCGCCGACGAGGTCAACCTGGTGGTGCTGCCGCCTTCGGACATGCCACCGGCGCTGGCCAGCAAG CGCATCCACGGCTACATCGTCGCCGAGCCGTTCAACGCCCTTGCGGAGAACCTCAAGGTCGGCCGGGTACAGCGCTTCACCGGCGATGTCTGGCGCAACC ACGCCTGCTGCGTGGTGTTCATGCACGAACACGACCTGGAGCGGCGGCCGCAGTGGTCGCAAAAGGTGGTCAACGCCATCGTCAAGGCCCAGCTATGGAC TCGCGGGCACCGCGCCGAGGCCGCACAGTTGCTGTCCAAGGCCGGAGCCAACCGCTACACGCCGCACGCACCGGAGGTCCTCGGCCGGGTGCTGGCGCCG GGCGCCGAGGAGCAGCAGGCCTATCTCGCCAGCGGCGCGATCCGCCACGCCGACTGGCAGGAGCGGCGCATCGACTTCCAGCCCTATCCCTATCCGAGCT ATACCGAGGAACTGGTGCGGCGGCTGAAGGACACCCTGATCGAAGGCAATAATGCCTTCCTCGCCAGCCTCGATCCGCGCCAGGTGGCCAGTGACCTGGT GGACGACCGCTTCGTCCGCCAGGCCCTGGCAGAGGTCGGCGGGTTGCAGGCGTTCGGCCTCGCCGAGGGCTTCGAGCGCAGCGAGGAGATCAGCCCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCAGACGCTGCGCCAGGGCGCGCTAGGCGTCGCCGGGCTGTTGACGCTGTTCGCCCTGTGGTGGCTCGGCGTGGCCCTGTTCGGCGCCGCCGACGGCCT TTCGGCACGCTTCTCGCCGCAGGCGACGTTGCTCAGCCTGGGTGAACTGCTGGAACGCCGCGAACTCTACGAGCACGTGCTGGTGAGCCTGAAACGGGTC CTGCTGGGCTTGTTCCTGGCGCTGCTGGTGGGAGTGCCGCTGGGGCTGCTGGTGGGCGCCTCGCGCAACCTGGAAGCAGCGACCACTCCGGCGTTCCAGT TCCTGCGGATGATCTCGCCGCTGTCGTGGATGCCCATCGCGGTGATGCTGATGGGCGTGGGCGACCAGCCGATCTATTTCCTGCTGGCCTTCGCCGCGCT CTGGCCGATCCTGCTGAATACCGCCGCCGGCGTGCGCCAGCTCGACCCGCGCTGGCTGCAACTGAGCCGCAGCCTCGCCGCCACGCCCTGGGAAACCCTG
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Amino Acid Sequence |
>ABC transporter substrate-binding protein
MCLDDPTHSRRDILKLAALLSAAGALPLLSSLQARAAAEPDAPVRIGYLPITDATPLLVAHANGLFEAEGIQAERPVLLRSWAQVIEAFISGQVNVIHLL SPMTVWARYGSKVPAKVVAWNHVGGSGLTVAPEIADVRQLGGKSVAIPFWYSIHNVVLQQLLRDNGLRAVSRAVGAALAADEVNLVVLPPSDMPPALASK RIHGYIVAEPFNALAENLKVGRVQRFTGDVWRNHACCVVFMHEHDLERRPQWSQKVVNAIVKAQLWTRGHRAEAAQLLSKAGANRYTPHAPEVLGRVLAP GAEEQQAYLASGAIRHADWQERRIDFQPYPYPSYTEELVRRLKDTLIEGNNAFLASLDPRQVASDLVDDRFVRQALAEVGGLQAFGLAEGFERSEEISP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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