Strain | Pseudomonas aeruginosa BWHPSA039 adkgf-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCTACGGGCTTCCGCGCCAATCTCGGGCGACGGGGGAAACACTGGCCGTTTCCAGGCCGGTGAGCACCAGGCGACCACGGGACTGGGTGGACTCGTCGA GGGCAATGCATCGGGTCACAGCGGCAATGGCGTCATCCTCGCCGATCTGCGCGGTGGTCTACCCTCGTTCTCAAGCCTTCCCGCGGCTGATCGTATTCAA AGCACAGTGCCCGGTCACGATGGGAATGGAACTATTCTCGCCAATTGGCAGGGTCCGCAGGCGACGGTCCAGGCCTCGCCTTCGACAGTGCGTGTAGAGG GGGTAGTTTCCAGTCCAGGTGGCAATGGCAGCATCCTTGCCGATCTGCCGGCTGAGCAGTCGTCGGTGCAGGCACTGCCTTCGGCCGTTAGGGCTCAGGG CAGCCTGCCTCGCCTCGAAGAGCGGAGCGCCGTTCTTGCCGAGCCTCCGGTTGGGCAGCCAGCGTTGCAAACCCTGCCGTCGGTTGCGCGCGTTGAGGGC
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DNA Sequence for Gene |
>Q044_02799
GTGCCCAGCAATGCCACACCGAGCAACAGCCACAAGTATCTGATCGAGACCAACCCGGCGCTCACCGAGCTGAAGCAGTTCCTCAACTCGGACTACCTGC TCGGTGGCCTGGGTATCAATCCGGATGACAGCAAGAAGCGCCTGGGCGACGGTCTATACGAGCAGCGCCTGGTACGCGAAGCGATCGTCCAGCGTACGGG GCAGCGCTTCATCGCCGGATTGAACAGCGACGAAGCGATGTTCCGCTATCTGATGGACAACGCCATCGCCAGCAAGGACGTATTGGGACTGACCCCTGGC GTCACCCTCAGCGCCGCCCAGGTGGCCGCGCTGACCCACGACATCGTTTGGCTGGAAGAAGTCGAGGTGAATGGCGAGAAGGTCCTCGCCCCCGTGGTCT ACCTGGCCCAGGCCGAGGGGCGGTTGGGCCCGAACGGCGCGCTGATCCAGGGGCGCGACGTGAACCTGATCACCGGCGGGGACCTGAGGAACGCCGGTAC CCTGCGCGCGCAGAACGACCTCAGCGCGACAGCCGGCAACATCGACAACAGCGGCCTGATCGAGGCCGGCAACCGCCTCGACCTGCTGGCCAGCGGCTCC ATCCGCAATGACCAGGGCGGCATCATTGCCGGGCGCGAGGTAAGCCTCTCCGCCCTTACCGGAGACGTTATCAATGAACGGACGGTGACCCAGCACCAGT CCTCCTACAGGGGAACCGGTACCACTGAGGCATTTGCCGATAGCGCCGCGCGTATCGAGGCTGCGCAGAAGCTGACCGTTTCGGCAGGTCGCGATGTAAC CAATATTGGCGGTGTCATCGACAGCAAGGGCGACCTCGCCTTGCAAGGCGGCAGGGATGTCCTGGTTTCGGCTGCGGTAGCGGAGCGGGGCTGGACGGCA GGAAGCCAGGCATACCAGACCCAGACGACCCAGATGGGCGCCGAAGTCGTGGCGGGGCGCGATATCAGCGTCAGCGCCGGACGCGATATCAGCGTCGTGG GCAGCCGCATCGACGCTCGTCGCGACGTGACATTCGAGGCGGGTCGCGATGTGGGCCTGGTCGCGGCTGCCAACGAAGAGCATGCCTATGGCAAGACCAA GAAGGTCACTTTCCAGGACGACAAGATCACCCAGCAGGCCACTCGCGTGGACGCTGGCGGCGACCTGGCGATCAATGCCGGACAGGACCTGCGGCTGGTC GCGAGCCAGGCCAGCGCCGGCGACGAAGCCTACCTGGTGGCCGGCGACAAGCTGGAGCTGCTGGCCGCCAACGACAGCAGTTACTACCTCTACGACAAGA AGAGCAAAGGCAGCTTCGGTAGCAAGAAGACCCGGCGCGACGAAATCACCGATGTGACGGCAGTGGGCAGCCAAATATCCAGCGGCGGCGACCTCACCCT GCTCAGTGGCGGCGACCAGACTTACCAGGGCGCGAAGCTGGAATCGGGCAACGACCTGGCCATCGTCAGCGGCGGCGCGGTGACCTTCGACGCGGTGAAG GACCTGCACCAGGAGAGCCACGAGAAGAGCAAGGGCGACCTGGCGTGGCAGTCGTCGAAGGGCAAGGGCCAGACCGACGAAACCGTACGCCAGAGCCAGC TCGTCGCCCAGGGCAACCTGGCGATCAAGGCCGTGGAAGGGCTGAAGATCGACCTCAAGCACATCGACCAGAAGACCGTGAGCCAGACCATCGACGCGAT GGTGCAGGTGGATCCGCAACTGGCGTGGCTGAAGGAGGCCGAGCAGCGCGGGGATGTGGACTGGCGCATGGTGCAGGAGGTGCACGATAGCTGGAAGTAC AGCAACTCGGGGTTAGGGGCTGCGCCGTCACTGGCCATTGCCATCGTTGCAGTTGCTTACCTCGGCCCGGTGTAT
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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Amino Acid Sequence |
>hemagglutinin
MPSNATPSNSHKYLIETNPALTELKQFLNSDYLLGGLGINPDDSKKRLGDGLYEQRLVREAIVQRTGQRFIAGLNSDEAMFRYLMDNAIASKDVLGLTPG VTLSAAQVAALTHDIVWLEEVEVNGEKVLAPVVYLAQAEGRLGPNGALIQGRDVNLITGGDLRNAGTLRAQNDLSATAGNIDNSGLIEAGNRLDLLASGS IRNDQGGIIAGREVSLSALTGDVINERTVTQHQSSYRGTGTTEAFADSAARIEAAQKLTVSAGRDVTNIGGVIDSKGDLALQGGRDVLVSAAVAERGWTA GSQAYQTQTTQMGAEVVAGRDISVSAGRDISVVGSRIDARRDVTFEAGRDVGLVAAANEEHAYGKTKKVTFQDDKITQQATRVDAGGDLAINAGQDLRLV ASQASAGDEAYLVAGDKLELLAANDSSYYLYDKKSKGSFGSKKTRRDEITDVTAVGSQISSGGDLTLLSGGDQTYQGAKLESGNDLAIVSGGAVTFDAVK DLHQESHEKSKGDLAWQSSKGKGQTDETVRQSQLVAQGNLAIKAVEGLKIDLKHIDQKTVSQTIDAMVQVDPQLAWLKEAEQRGDVDWRMVQEVHDSWKY SNSGLGAAPSLAIAIVAVAYLGPVY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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