Strain | Pseudomonas aeruginosa BWHPSA039 adkgf-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCAAGGCCAACGGCTACCGCGACTATGCGGCAGACACCGTGTGGATCCTGGAGCTGGTCACCGGCGCCCAGGGCGCCGGCTTCTCCCTGGAGGAGATCGC TCGCCTGCTGCCGAGCGGCGACGGCGCCTGGCAGCACGGCGAGCTGCTCGAAGGCTTGCGCCGCAAGGTGGCCGAGATCGAGGCCCTGCAACGACGCCTG GAACAGAACAAGGCACAATTGCTGGTGGCCATCGAAAGCATCGAGAACAAGCCGGACGGTCTGCAGTGCACGGAAAACACCCAGCGCGTGCTGGAGCGCC TGCGCGAGGAAGGCCCTCCACAGACGGTCGGGCGTCCACGGCAAACCCGCTCGCGGGGGTCCTCTCCCACGCCGGCGGAGCAGCGGCTTTCCGACGCTTG ACCTTGAAGTCGACTTGAATCTTAGAGTGACGCCAACCCACCCGGACAGCCTGCCGAAACCGGCTGCCGACGGGATCACTCACCGAGGAAGGTCAACGCA
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DNA Sequence for Gene |
>Q044_02471
ATGACCAAGCGCATCCTGCACGTCGTCACCAACGTCGCCCACTATGCCGATCCGACCCAGCCCACCGGGCTGTGGCTGTCGGAGTTGACCCATGCCTACG AGATCTTCGCCGCTCGGGGCTACCAGCAACGCCTGGTCAGCCCCCGCGGCGGCGAGTCGCCGCTGGAGCCGCGCGCCCTCGGCTGGCCCCACGCCGACGC CAGCGCCAAGGCCTGGCTGGCCGACGAGACACGCCTGGCGCTGCTGGCCGACACTGCCGCTCCCGAGCAGGTCGACGCGGAGGCGTTCGACGCCATCTAT TTCACCGGCGGCCACGGCGTGATGTGGGACTTCCCCGACGACGCCGGGCTGCAGCGCCTGACCCGCGAGATCTACCAGCACGGCGGCATCGTCTCGTCGG TCTGCCACGGCTATTGCGGCCTGCTCAACACACGCCTGGACGATGGCCGCCTGCTGGTCGCCGGGCGCCGCCTCACCGGCTACTCCTGGATCGAGGAAGT GCTCGCCGGGGTCGCCCGCAAGGTGCCGTACAACGTCGAGGAAGAAATGAAACGACGCGGCGCGCTCTACGAAAGAAGCCTGCTGCCGTTCACCAGCAAG GTGGTGGTCGACGGCCGCCTGGTCACCGGGCAGAACCCGCAGTCGGCCAAGGCCACGGCCGAGCAGGTGGCCGCCCTGCTCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGCGGCGTGTCAGTCCTGCGCGCGCCTCATCTGGAAGTCATGGCGCCGCTTGCCGATGAAGAACGATTCTGCATCGTCCCGTCGGCCAGGGGCCGCAGG ATCGTCGCAGTGCTGGTCGTGTGGTAGGGGTCGAACTCGTCGAAGGGCGACCTGACATGGATGGAGCCGCCATCGACCGGTTCCGCCTTGCGGGCTTCGC GACGCGGCGGCCTACGCCAGCGGCTTGAGCATGAGGAAGTTGCGCACGCTGTAGTAACCCTGCGAATCCTGCCAGTCGAGAGCGGCCAGGTTCTGCATGC CGGCCTCCCACGGCTGGTTGTCGAACAGCGCCTCCACCGTGCGCTGGTTGCCGAAGGCACAGAAGAAATGCCGGAACCAGTGCAGGCGCGCGTCCAGCGG CTCGGCGCGGATCGCCCGCTCGATGCTCGGGAACAGCCCGGCCGGCAGCGGCGGCGCCTTGCCCTCGGCGCCGCGCAGGCCGAGGTTGCCGATATGCACC
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Amino Acid Sequence |
>hypothetical protein
MTKRILHVVTNVAHYADPTQPTGLWLSELTHAYEIFAARGYQQRLVSPRGGESPLEPRALGWPHADASAKAWLADETRLALLADTAAPEQVDAEAFDAIY FTGGHGVMWDFPDDAGLQRLTREIYQHGGIVSSVCHGYCGLLNTRLDDGRLLVAGRRLTGYSWIEEVLAGVARKVPYNVEEEMKRRGALYERSLLPFTSK VVVDGRLVTGQNPQSAKATAEQVAALLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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