Strain | Pseudomonas aeruginosa BWHPSA038 adkfW-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AAGGACCTGCGCGCGCGCCAGGAAACCCTGCAGTGGCTGTTCTGGCAGATGGGCGGGCTGGGGCCGATGGCCGGGCAGAACCACCATTTCAACCGCTTCG CCCCGGAGAAGATTCCCTACGCCATCGACCGTTACGTCAAGGAAACCGCGCGCCTGTACGGCGTTCTCGACCAGCGCCTGGCGGACCGCGCCTTCGTCGC CGGCGACGACTACAGCATCGCCGACATGGCCATCTATCCGTGGATCGTCCCGCACCAGTGGCAGGAGCAGAATCTCGCCGACTTCCCACACCTGCAGCGC TGGTTCGAGAGCATTCGCCAGCGTCCGGCGACGCAACGCGCCTATGCTTTGGTGGAGCGCATCAATCCGCCGCAGTAGCGAGTCCCGAGCCGGCCTGCGG ACGTCCTCGCGGACGACCGCAGGCGGAGCTTGCGCAGCCCTGCGCTCCTCACTAACGTAGCGCCTCTCGACGCGACCACTCCCGCAGGAGCCCCCACCCC
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DNA Sequence for Gene |
>Q043_03967
ATGGCCTCGCCAGCCTTCATGCGTTTTCTTCCCCGTTGCGGCGCTGCCGCGGCCTTCGGCACCCTCCTGGGCCTGGCCGGTTGCCAGTCCTGGCTCGACG ATCGCTACGCCGACAGCCTGCCGCCGACCTCCGGCGTACAACCGATCAAGGGCCTGGCGCAAAACGTATCGATCCGGCGCAACGCGCTGGGCATGCCACT GATCGAAACCGGCACCTTCCATGACGCGTTGTTCGCCCTGGGCTACGTACACGCCTCCGACCGCCTGAGCCAGATGGTCAGCCTGCGCCTGCTGGCCCAG GGACGGCTGGCCGAGATGGTCGGCCCCGGCGCGCTGGAGATCGACCGTTTCATGCGTACCGTGAACCTGCGCCAGGCCGCGGAGATCCAGTACAGGAACG CCTCGCCGCGCCTGCAACGCTTCTTCGAGGTCTACGCGCGCGGGGTCAACGCCTACCTGTATCGCTATCGCGACAAGCTGCCGATGGACCTGGCCCAGTC CGGCTACCGTCCGGAATACTGGAAGCCCGAGGACTCGGCCCTGGTCTTCGCCCTGCTCAACTTCGGCCTGGCGGTGAACCTACAGGAAGAAATCGCCTCG CTGACGCTCGCGCAGAAGGTCGGCAGCGACAAGCTGGCCTGGCTAACGCCGACCTATCCCGACGAAAACCTGCCGTTCGACGAGGCGGAAAAGCTCAAGG GCCTGCGCCTGGACGGGCAGGTTCCCGGCCTCGCGGGCGTCGAGGGCGCGGCGCGGCAGGTCGCAGCGCTGAGCATGCTCGGGGTCGCCGCCTCGAACAA CTGGGCTATCGCGCCACAACGCAGCCGCAGCGGCAAGAGCCTGATGGCCAACGACACCCATCTGCCACTGAGCATGCCGTCGGTGTGGAACTACGTACAG ATCTGCTCGCCCAAGTACCAGGCCGCGGGCGTTTCCATCGCCGGTCTGCCGGGCGTGGTGGCGGGCTTCAACGGCAAGCTGGCCTGGGGCATGACCATGG TCCTGGGCGACAACCAGGATCTCTACCTGGAACAGTTGCGACGCCAGGGCAACCGGCTCTATTACCTGGCCGACGGCAAGTGGCAGCCAACCCGCGAACG CCAGGAAACCTTCTTCATCAAGGGCCAGCGGCCGATCCGCGAGGTCATCCACGAAACCCGCCATGGCCCGCTGCTCAACAGCGCCCTGGGCGAACGCAAG AACATCCTCCAGCCGCTGCCGCTGAAGAGCGGCTACGGACTGGCCTACCGGAGCATCCAGCAGGAAGCCGACAAGACCCTGGACGGCTTCTTCGACCTGT CGCGGGCCAAGACCATCGAGCAGGCCTTCGACGCCACCCGCGAGATTCGCGCGATGCCGCTGAACATCGTGTTCGCCGACGAAAAGCACATCGGCTGGCA GGTCACCGGACGCTATCCGAACCGCAAGGAGGGTCGCGGCCTGCTGCCCTCCCCTGGCTGGGACGGCCGCTACGACTGGGATGGCTATGCCGACCCGATC CTCCACCCCTCCGACCAGGACCCGCAGCAGGGCTGGCTGGGTACCGCCAACCACCGCACCGTGCAACCCGGCTACGGCGCTCAGTTGTCCAACTCCTGGT ACTACCCGGAGCGCGCCGAGCGCATCGCCCAGCTCGCCGGTGCCAGCAAGAGCCACGACACCCAGAGCATGATCCGCATGCAGTACGACCAGACCTCGCT GTTCGTCGCCAAGCTGCAAGCCATGTTCGACAATCCCGGCATGGCGGCGCCGCTGCGCCAGGCCATCGACGCCTTGCCGGAGGCGCAACGCAGCCGGGCG CGGGAGGCCTACGACCGGCTGATGGCGTTCGACGGCAAGCTGACAGCCAGCTCCAGCGACGCCGCGCTGTACGGCGCCTTCCTCCACGAGAGCGCCAGGC AGATATTCCTCGACGAGCTAGGACCGGAGGACGGCCCTGCCTGGAAAGCCTTCGTCGAGACCGCCAACCTCTCCTACTCGGCGCAAGCCGACCACCTGCT CGGGCGCGACGACAGTCCGTTCTGGGACGATACCCGCACTCCGCAGAAGGAGGACAAGCCGGCAATCCTCGCGCGCAGCCTCGCCGCCGCCGTGGAGTTC TGCGAACAGCGACTGGGGAGCGAGCGCAAGGCCTGGCAATGGGGCAAGCTGCACACCTACGAATGGCGGAGCGACAGCTCGAAAATGGCCCCCTACCTGG GCGCCGGCGAGCGCGCCGGACTCGGCGCGATCAAGGGCTATCTCGATCGCGGGCCCTATCCGGCCGGCGGCGACCACACCACGCTGGACGTATCGGCCTA CGGCTGGGGCCAGGACTTCGACACTTGGCTGATCCCGGCGATGCGGCTAATCGTCGACTTCGGCCAGAGCGAACCGATGATCGGCGTGAACAGCAGCGGC CAATCCGGCAATCCGGCCAGCCCACACTACGCCGACGGTATCGACGCCTGGCGCAAGGGGCGCTACGTCAGCTTCCCGTTCCAGCCACAGAACCTCGATC GCGTTTACGGCAACAAGCGGCTGACGCTCACTCCCGCTCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGGACGGCGCGGAACTTTCCTCCGCGTCGTGGCTCTGAACAGCCGACTTACTCCATGATCATCTTCAGGGCGTCCTTCCGGACGCCCTTCTTTTATCCC CCTCCCGGAAAGCCTCCGTTTTCTCGAAAGCCCGGGCACGGGATCGAACTGATCTCACTCCTCTCCGGCCTCTTCCACGGGCGCCACCAGCGCCCGGTCC AGCCAGTCCGTCGGCAGGCTCTTGCTGGCGCGGGCACCGAGCAGCTTGAGTTGCTCGCTGCGACTGATCAGGTTGCCACGTCCCTCGGTGAGCTTGTTGC GCGCCGCGGCATAGGCCTTGTCCAGTTGCTGCAGGCGCGAACCGACCTCATCGAGGTCCTGGACGAAGAGCACGAACTTGTCATACAGCGAACCGGCACG TTCGGCGATTTCCCGCGCATTCTGGTTCTGCCGCTCCTGGCGCCAGAGGCTGTCGATTACCCGCAGGGTGGCCAGCAGGGTGGTCGGGCTGACGATCACG
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Amino Acid Sequence |
>acyl-homoserine lactone acylase subunit beta
MASPAFMRFLPRCGAAAAFGTLLGLAGCQSWLDDRYADSLPPTSGVQPIKGLAQNVSIRRNALGMPLIETGTFHDALFALGYVHASDRLSQMVSLRLLAQ GRLAEMVGPGALEIDRFMRTVNLRQAAEIQYRNASPRLQRFFEVYARGVNAYLYRYRDKLPMDLAQSGYRPEYWKPEDSALVFALLNFGLAVNLQEEIAS LTLAQKVGSDKLAWLTPTYPDENLPFDEAEKLKGLRLDGQVPGLAGVEGAARQVAALSMLGVAASNNWAIAPQRSRSGKSLMANDTHLPLSMPSVWNYVQ ICSPKYQAAGVSIAGLPGVVAGFNGKLAWGMTMVLGDNQDLYLEQLRRQGNRLYYLADGKWQPTRERQETFFIKGQRPIREVIHETRHGPLLNSALGERK NILQPLPLKSGYGLAYRSIQQEADKTLDGFFDLSRAKTIEQAFDATREIRAMPLNIVFADEKHIGWQVTGRYPNRKEGRGLLPSPGWDGRYDWDGYADPI LHPSDQDPQQGWLGTANHRTVQPGYGAQLSNSWYYPERAERIAQLAGASKSHDTQSMIRMQYDQTSLFVAKLQAMFDNPGMAAPLRQAIDALPEAQRSRA REAYDRLMAFDGKLTASSSDAALYGAFLHESARQIFLDELGPEDGPAWKAFVETANLSYSAQADHLLGRDDSPFWDDTRTPQKEDKPAILARSLAAAVEF CEQRLGSERKAWQWGKLHTYEWRSDSSKMAPYLGAGERAGLGAIKGYLDRGPYPAGGDHTTLDVSAYGWGQDFDTWLIPAMRLIVDFGQSEPMIGVNSSG QSGNPASPHYADGIDAWRKGRYVSFPFQPQNLDRVYGNKRLTLTPAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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