Pseudomonas aeruginosa BWHPSA038, Q043_03484
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA038 adkfW-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGCGAGCTGCGCCAGATCACCCACCAGGGGCCGATGCTGCTGCAGGCGCAGAAGAACGACATCCGCCTGGAGGCCGAGCAGAGCGTGGAGGTCAGCG CCAGCCAGCAGCACGTGCTGGTCACCGCGAAGGAGCACATCACCCTGATGTGCGGCGGCGCCTACCTGACCCTCAAGGGCGGCAACATCGAGCTGGGCAT GCCCGGCAACTTCGTGGTCAAGGCGGCGAAGCACAGTCATGTCGGTCCCGCTCATGCATCGACCAGCTTCAACGCCTGGGATTCGACACCGTTCGATGAC CGGTATGTCCTGCGCGACGAAGCCACGCTGGAGCCGTTACCCAATATCGCCGTTGAAGTGATACGAGGCGATGGTGGTGTGGTGAAACTGATGACCGACA GCCAGGGCCGTTTACCCAAGCAACAACACCTGGCCATGGACCCGGTGCAGATACGCATCCTGGGCAAGGGCAGTCACAACAGCGACACGGAGTCCAACAC
|
|
| DNA Sequence for Gene |
>Q043_03484
ATGAGCAGCGAACCGCTCGAGCCGAATCAGGATGTGATCATCCCTCGCTCTCGCGACAGTCTGGGACGGCCTGTCTACAAGGCGCAGTTGACCCGTACCG ACAACCAGAGCGAAAAGGTGGCACTGATTCGGCAGACCGCTCCCCTGCCGGTGATCTTCATTCCGGGGATCATGGGAACCAACCTGCGCAACAAGGCAGA TAAAAGCGAGGTCTGGAGGCCGCCGAATGGTCTGTGGCCCATGGATGACCTGTTTGCCTCCATCGGTGCGTTGTGGACTTGGGCCTGGAGGGGTCCAAAG GCCCGTCAGGAGCTCCTGAAGGCTGAGCAAGTAGAAGTCGATGACCAGGGTACGATCGATGTCGGTCAATCTGGTTTGTCCGAAGAAGCTGCCCGCCTGC GCGGCTGGGGCAAGGTCATGCGCAGTGCGTATAACCCGGTCATGGGATTAATGGAGAGGCGACTGGATAACATCGTCAGCCGGCGGGAACTCCAGGCATG GTGGAATGACGAAGCCCTCTCTCCTCCTGGAGATCAGGGTGAGGAGCAGGGAAAGGTGGGGCCGATCGATGAAGAGGAATTGCTCAGGGCCAGCCGATAC CAGTTCGATGTCTGGTGCGCCGGCTATAACTGGCTACAGTCCAACCGGCAGTCGGCGCTGGATGTACGCGACTATATCGAGAATACCGTGTTGCCTTTCT ACCAAAAGGAGTGCGGTCTCGATCCCGAGCAGGTGAGACGTATGAAGGTCATTCTGGTCACCCATTCGATGGGAGGGCTGGTGGCTCGCGCCCTGACGCA GTTGCACGGCTATGAGCGCGTATTGGGGGTGGTGCATGGCGTACAACCTGCGACGGGTTCCTCGACCATCTACCATCATATGCGCTGTGGCTATGAAGGT ATCGCACAGGTCGTGCTGGGGCGAAATGCCGGTGAAGTGACAGCCATTGTCGCCAATTCGGCCGGCGCGCTGGAATTGGCCCCTAGCGCGGAATACCGGG AAGGGCGTCCTTGGCTATTTCTGTGCGACGCGCAGGGGCAGGTGCTCAAGGATATCGATGGAAAGCCTCGGGCTTATCCGCAGAATCAGGACCCTTATGA AGAGATATACAAGAACACTACGTGGTATGGATTGGTGCCTGAGCAAAATTCACAATATCTAGACATGTCAGACAAAAAAGAAGGTTTAAGAGTTGGCCCC CGTGATAACTTTGAAGACTTGATAGATAGCATTGCTAATTTTCATGGTGAATTGTCAGCAGCAGGATATCACTCAGAGACCTATGCCCATTACGGAGCTG ACGATAGCCGCCATAGTTGGCGCGACCTGATCTGGAAGGGTGACCCTACCCCTCTGGAGACCCCTGGTGCCACACTCAACGACGATGAGAACGGCACTTA CAACAGTTGGTTCCGCCGGGGCTTGCCCACCATAGTGCAGGGTCCGCTGGAGACGGGAAATCCTCTGGACGCTTCCGGTAGCGGAGGTGACGAAACGGTA CCGACCGACTCCGGCCAGGCGCCTGCCCTGGCGGGCGTCAAGGCCAGCTTTCGGCATGGCAGCAAGGGCAAGGGACAGGCCAATACCAAACGGGGCTATG AGCACCAGGAGAGTTACAACGATGCTCGTGCTCAATGGGCAGCGCTATATGGGGTGATCAAAATCACCCAGTTGGCGGATTGGCATCCTAATGACAAAGG AGGGACATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGCATCCCCGTCGGTTGCTTGCTGTACTTGGAGTGGTGGTCTTGACCAGCATGACCAGTTGCACTTCGTTTTCTTCTTCTCGGAGCTCTTCCATGGACAA GACCGGATGGATTACTCATTGCTTTGGTCGCTTTCTGATTGATCTGCCACCTGACGCGGTAATCAATGCCGGATACTACCTATGGGGAGACAGAATTGAG TACTTAGATGATAAACCTACCGAACTGGCAGCCAGGGTTGATCGTCTTGAACAAGAGTGGAGGACTCAGAGACATAAATCCAAAGGCAACATGCTTCTTC GTAAAATTGACTTTGGCAATGAATCAGTAGGTTTATTGTCTTGGTCTTCAGAGGTTGCCTCTAAAACCTATTTATTGGATACCTATGTTACATCTAAGCC TACGTGGCATGCCTATCGTTGGAAAGGGAAAGTTTCGGTAGACAGAGAGCAACATGCTGTGGAGATATCTAGGGCTTTAGCTCGAAATCTACGTTCTCGC
|
|
| Amino Acid Sequence |
>hypothetical protein
MSSEPLEPNQDVIIPRSRDSLGRPVYKAQLTRTDNQSEKVALIRQTAPLPVIFIPGIMGTNLRNKADKSEVWRPPNGLWPMDDLFASIGALWTWAWRGPK ARQELLKAEQVEVDDQGTIDVGQSGLSEEAARLRGWGKVMRSAYNPVMGLMERRLDNIVSRRELQAWWNDEALSPPGDQGEEQGKVGPIDEEELLRASRY QFDVWCAGYNWLQSNRQSALDVRDYIENTVLPFYQKECGLDPEQVRRMKVILVTHSMGGLVARALTQLHGYERVLGVVHGVQPATGSSTIYHHMRCGYEG IAQVVLGRNAGEVTAIVANSAGALELAPSAEYREGRPWLFLCDAQGQVLKDIDGKPRAYPQNQDPYEEIYKNTTWYGLVPEQNSQYLDMSDKKEGLRVGP RDNFEDLIDSIANFHGELSAAGYHSETYAHYGADDSRHSWRDLIWKGDPTPLETPGATLNDDENGTYNSWFRRGLPTIVQGPLETGNPLDASGSGGDETV PTDSGQAPALAGVKASFRHGSKGKGQANTKRGYEHQESYNDARAQWAALYGVIKITQLADWHPNDKGGT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|