Strain | Pseudomonas aeruginosa BWHPSA038 adkfW-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CACCGACCGCTTCGAGCTGTTCATCGGCGGCCGCGAGATCGCCAACGCCTATTCCGAGCTGAACGACGCCGAGGACCAGGCCGAGCGCTTCATGCTGCAG GTCAAAGAGAAGGACGCTGGCGACGACGAGGCGATGCACTACGACGCCGACTTCATCAATGCCCTGGAATACGGCATGCCGCCGACCGCCGGCGAAGGCA TCGGCATCGACCGCCTGGTGATGCTGCTGACCAACTCGCCGTCGATCCGCGACGTGATCCTGTTCCCGCACATGCGCCCGCAGGCCTGAGCGCCGCAACA GTCCATGGAAAAGCCGCCTTCGGGCGGTTTTTTCATGGCCGCGCGGTGTCCCGGCCGCCGGGCCAGGGGCCGATAGCCGCCGATCCGCCGGCTGACCACG GAAGGTGCGGGTGGGATCGGAGCTTCCCCGATAGCGGCCGATTGATTCCACGCGAAAAAGTCCGAACAATGCCCCATCGTCCGCGAGCGGAGGAAACACC
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DNA Sequence for Gene |
>Q043_01073
GTGTCCCGAGTAGCTCCCAGAGACAGCGCCGCGCAGGCCGCCAGCGCGGTAGCCGAAAGCGTTCGTTACCAGGGCCGCAAGGCCAGCCGCCAGGGCAGCG AGCAGCGGCGCCAGGCGATTCTCGATGCCGCCATGCGCCTGATCGTCCGCGACGGCGTACGGGCCGTGCGCCACCGCGCGGTGGCCGCCGAGGCCCAGGT GCCGTTGTCGGCCACCACCTACTACTTCAAGGACATCGACGATCTCATCACCGACACCTTCGCCCTCTTCGTCGAGCGCAACGCAGAGGCGCTGTCGGCG TTCTGGAGCAGCGTGGAGGGCGACCTCCAGGAGATGGCCGCGGTGCTGGCCGACGACCCCGGCGCCCGTGGCTCGCTGGTGGAACGGATCGTCGAGCTGG CCGTGCAGTATGTCCAGGTCCAGCTCACCGAGCGCCGCGAGCACCTGCTGGCCGAACAGGCCTTCCGCCAGGAGGCGCTGCTCAACCCGCGCCTGCGCGA ACTGGCCGATGCCCACCAGCGGATCCTCTCCCTCGGCGCCGTGCATTTCTTCCAGGTGCTCGGTTCCGGGCAGCCCGAGCAGGACGCCAAGGTGTTGACG TCGATTATTCTGCAGATGGAATATCAGGGCCTCGTGGACGGGGTCGAGCAACTGGCCGTGGACGAAATGCGCGCCATACTCAGACGGTACCTGAATCTGG TCATGGGCCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCTGAGCGTCAACCCCGCCATGGCGGGGTTTTTCATACCCGAACCTTCCCTCGGCCAGCCGGTCGCAGGTTGCGGAGGGTTCCTAAGGAGCGTGTGATGA AAGCCTGGCGTTGCCTGGTGGTCCTGAGTTTCCTGCTGTTGGGCGGTTGCCTGGTCACCTTCAAGGAGCCGATACCGCCGCGCGAGGCGGCGCCGAGCCA CCTGCTCGGGACCTGGAGCCGCGAGAACGAGTGGAAGGAAGAACAATTCCTGGAGATCACCCGTTCCGGCAGCAATGTCTACCGCGCGCTCAGCTACGTG GACAGCAAGGACAATACCGAGAGCCTGGAGGACTACGGCTTCACCGTCTCCCACCAGGGCAAGCGCTGGTACCTGTCGGCCGGCCTGCCGAAGAGCCTGG GCGGCAACTTCGTCATCGCCGGCTTCGAGATCACCGACGGCGACGAACTGGTGATCTACAACCTCGACGTCGAGCGCATCGTCGAGGACCTCGGCGCCGG
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Amino Acid Sequence |
>TetR family transcriptional regulator
MSRVAPRDSAAQAASAVAESVRYQGRKASRQGSEQRRQAILDAAMRLIVRDGVRAVRHRAVAAEAQVPLSATTYYFKDIDDLITDTFALFVERNAEALSA FWSSVEGDLQEMAAVLADDPGARGSLVERIVELAVQYVQVQLTERREHLLAEQAFRQEALLNPRLRELADAHQRILSLGAVHFFQVLGSGQPEQDAKVLT SIILQMEYQGLVDGVEQLAVDEMRAILRRYLNLVMGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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