Strain | Pseudomonas aeruginosa BWHPSA038 adkfW-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGACGCGCTCGACTTCGCGAGCGATCAGGCCATAGCAGACGTAGTTGAGGCCGCTGCCGCCGTAGGCTTCGGGAATGGTCGCGCCGAGCAGGCCGGTCTC GCCCATCTCGCGGAAGATCTTCGGGTCGGTCTGTTCGTGGCGGAAGGCTTCGAGCACGCGCGGGGCCAGCTTGTCCTGGGCGAACTGCTGGGCGCTGTCG CGAACCATGCGCTCTTCTTCGGTGAGCTGCTGGTCCAGCAGCAGGGGATCTTCCCAGTTGAAGCTAGCTTTGGTGGCCATGCGTACATCCTCGTCAAGCG GTAGCGGAGGCTGGCGTGGGCCAGCCGGAATGGAAGCATCCTAAGAGCCTAGCGAATGGGGTGGCAAACGAGGAATTCGCACGCACTTGTGCTATTTTCT CACTCCGAGAAAATGAGTCTCGTATTTCATGCCCTTGAAGAGGCGCGAGGAATCGTGACCTGGGCGTCATAGATGCGAAACCGGCACTCCGGAGTCCTCC
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DNA Sequence for Gene |
>Q043_00277
ATGCGACGCAAGATCCCTTCCACCGCCGCGCTGGTCAGCTTCGAATCCGCCGCGCGCCACGAGAGCTTCACCAAGGCGGCGGAGGAGTTGTCCCTGACCC AGAGCGCGATCTGCCGGCAGATCGCCACGCTCGAGGAGTTCCTCGGTGTCGAGCTGTTCCGTCGCTCGCGGCGCGGGGTCAAGCTCACCGAGGCCGGGCT GTCCTATAGCCGGCGGGTGGCGGTACGCCTCGACGCGGTGGAGCGCGACACCCTGGCGGTGATGGGGCACCAGGGCGGCGGCGCGATCGAACTGGCGGTG GTGCCTACCTTCGGCACCCAATGGCTGTTGCCGCGGCTCAAGCGCTTCCAGCGGCTGCACCCGGAGGTCACGGTCAACCTGACCAACCGCACCCGCCCGT TCCTCTTCGCCGACACCGAGTTCGACGCCGCGCTGTACTTCGGCGACGCCGACTGGTCGGGTACCGTCTCGCATTTCCTGATGCGCGAGAATCCGGTGCC GGTGTGCAGCCCGGAGCTGCTGGGCGGGCGTCGAACGCTGAGCGCCGAGCAGGTCGCCGGGCTGCCGCTGATGCAGCAGAGCACCCGGCCCTACGCTTGG CGCCAGTGGTTTCACTCCCAGGGACTGAACGTCGCCCACGACATGAGCGGGCCACGCTACGAGCTGTTCTCCATGCTTGCCCAGGCGGCCATGCACGGCA TGGGCATGGCCCTGATACCGCCCTTCCTGATCCAGGACGAGCTGGCCGACGGAAGGCTTATCGTGCCCATGCAACATGCCTATTTGAGCGAGAATGCGTA TTACCTGATCATTCCCGAGCGCAGGGTCGAATCGGCGATGCTCAATGCCTTCCGCGACTGGCTGGTGGAAGAGGCCAGGCAGTACCGCGAGGCCAACGGG CTGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCGCAGGAACATCGGGCGGCGCAGGCAGGACGCGCCGCCCCGGGACCGGGCCGATCCGCCGGGTCCCGCGGAGCCGCGGCGGCGATACCGCCGGGCAT CCTCCACGACGGCCAGGATGGCGGCCGCGGAGCACCACACCAGGAGTTCACATGAATTTCCACACCCGCAAGTGGGTCAAGCCAGAAGATCTCAACCCCA ACGGCACCCTGTTCGGCGGCAGCCTGCTGCGCTGGATCGACGAAGAAGCGGCGATCTACGCGATCATCCAGCTGGGCAACCAGCGCGTGGTCACCAAGTA CATTTCCGAGATCAACTTCGTCAGCTCGGCGCGCCAGGGCGACATCATCGAGCTGGGCATCACCGCCACCGACTTCGGTCGTACCTCGCTGACCATGACC TGCCACGTGCGCAACAAGATCACCCGCAAGAGCATCCTCACCATCGACAAGATGGTCTTCGTCAACCTCGGCCCGGACGGCCTGCCGGCGCCCCACGGCA
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Amino Acid Sequence |
>LysR family transcriptional regulator
MRRKIPSTAALVSFESAARHESFTKAAEELSLTQSAICRQIATLEEFLGVELFRRSRRGVKLTEAGLSYSRRVAVRLDAVERDTLAVMGHQGGGAIELAV VPTFGTQWLLPRLKRFQRLHPEVTVNLTNRTRPFLFADTEFDAALYFGDADWSGTVSHFLMRENPVPVCSPELLGGRRTLSAEQVAGLPLMQQSTRPYAW RQWFHSQGLNVAHDMSGPRYELFSMLAQAAMHGMGMALIPPFLIQDELADGRLIVPMQHAYLSENAYYLIIPERRVESAMLNAFRDWLVEEARQYREANG LG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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