Pseudomonas aeruginosa BWH036, AJ76_06314
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH036 adTyH-supercont1.54, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCAAACTTAGTAGAGTCCGTTTTCCGAGCAGGAGACGGCAGTGAAAAAGCGTTTTACCGAAGAGCAGATTCTCGACTTCCTCAAGCAGGCGGAGGCCGG TGTGCCGGTGAAGGAACTGTGTCGCCGACACGGCTTCAGTGATGCCTCGTTCTACACCTGGCGGGCCAAGTTTGGCGGTATGACCGTGGCGGACGCCAAA CGGTTGAAGGATCTTGAACTGGAAAACAGCCGATTGAAGAAGCTGCTCGCCGAGGCCCACCTCGACATCGAGTCGCTGAAAGTGGTCGCCCGGGGAAAAG GGTAAGCCCGACAGCACGGCGGGAGGCGGTGCAGGAG
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| DNA Sequence for Gene |
>AJ76_06314
ATGCAGGCGCGAACCGGCATCTCCGAGCGTCGTGCCTGTCAGTTGATCGGGCTGTCCCGCTCGGTGTTGCGCTACCAGCCGCGAACCAGTGTGCAAAACA TCGAGCTGCAAGCCCAACTGGTGGAACTGGCCCAAGAGCGCCGGCGCTTTGGCTATCGCCGCCTGCACATCCTGCTGCGGCGTGCTGGCGTGCAGGTCAA CCACAAGCGGATCTATCGCCTGTACCGCGCTGCCGGCTTGATGGTGAAACGGCGGCGCCGCCGCCATGGCGTCGCGGTGGAGCGCGAACGTCTGAGTTTG CCGAGCGCACCAAACCAGGTCTGGTCGATGGACTTCGTCTTCGATGCACTGAGCACCGGGCGGCGGATCAAATGCCTGACGGTGGTCGATGACTTCACCA AGGAGTCGGTCGGCATCCTGGTGGAGCACGGTATCAGCGGCTTTCGCGTCACACGGGCGCTGGACGAGATGGCGCGGTTTCGCGGCTACCCGAAAGCGAT CCGCACCGACCAGGGGCCCGAGTTCACCGGCAAGGCACTCGATCAATGGGCCTATCAGCGCGACATCAAGCTGAAGCTGATTCAGCCTGGTAAGCCCACG CAGAATGCCTTCATCGAGTCGTTCAACGGTAAGTTCCGGGACGAATGCCTCAATGAGCACTGGTTCTGTTCGCTGGCCGAAGCGAGAATCCGCATCGCGG CCTGGCGGCGGGATTACAACGAACACCGACCGCACAGCGCGATTGGCAATCTCACCCCGGCAGAATTTGCTGCAAGTTGGCGAACTCGCCAGCAGCAGCT GAAGCAGGAAAAATTAATATCAACCCCAGGGCCTACTAACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAGCGGTACTAAAACTGGGGACAGGTCAGCTTGAACGAGTCTACGAAACCAGGAGTGACTCACTACTATGCTGCGCTGTGAGATAGATAAGTGTGTGGA AAAGTGGTGGTCATCAGCGCCGAGTGTGGTTGGCGTTGTAGAAGGCTCAGATATGGGGAGGAGTGGCCCGCAAAAACACCTCCTTCTCCTGAGTAGCTGA GAGGGGTGAGGTTTGGCTCTCTATTCCAATCAACATCGAACCTTCAGATCGGAACTGCTGTAGTTTGCAGATGGCAGTAATCGGCTGATTGCCACCGCTC TATCAAGTTGGCGGATCGTCATGAGAGAACTTGTTGCTGGGCATGAACCGGTAGCCCTTTCTTGTCGTTCGCCGGTGCGAATGCAGCCATTTCTGCATTC CGGCAGGCCCTTTCGGGTAAGGCTTTTACCCTTGTGAACCATTCCCTTCACCTTTCAAGCCCATTTCCCCTTTGGGCCATTTGTGCCCCTGTAGTGGTCT
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| Amino Acid Sequence |
>transposase IS407
MQARTGISERRACQLIGLSRSVLRYQPRTSVQNIELQAQLVELAQERRRFGYRRLHILLRRAGVQVNHKRIYRLYRAAGLMVKRRRRRHGVAVERERLSL PSAPNQVWSMDFVFDALSTGRRIKCLTVVDDFTKESVGILVEHGISGFRVTRALDEMARFRGYPKAIRTDQGPEFTGKALDQWAYQRDIKLKLIQPGKPT QNAFIESFNGKFRDECLNEHWFCSLAEARIRIAAWRRDYNEHRPHSAIGNLTPAEFAASWRTRQQQLKQEKLISTPGPTN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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