Strain | Pseudomonas aeruginosa BWH036 adTyH-supercont1.9, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGACGAGGCGGAAACCATCAAGAACACCACCATCGCCGAAGAGCTGGCCCTGCCGCCGGTGAAGATCCACTGCTCCGTTCTCGCCGAAGACGCCATCAAG GCCGCCGTTCGCGACTACAAGCAGAAGAAGGGTTTGCTCTAAGCCGCTCGTGACGAGTAAGGAGTTGCAATGGCCATCAGCATGACCGAAGCCGCCGCCA AACACGTGCAGCGCTCCCTCGAGGGGCGCGGCAAGGGCGAGGGTATCCGTCTTGGCGTGCGCACCACTGGCTGTTCCGGGCTTGCCTATGTCCTCGAATT CGTCGATGAACTGGCGGCCGAGGACCTGGTCTTCGAGAGCCATGGCGTGAAGGTCATCATCGACCCGAAAAGCCTGGTCTATCTCGATGGCACCGAGCTG GACTTCACTCGCGAAGGGCTCAACGAAGGCTTCAAGTTCAACAATCCCAACGTTCGTGGCGAATGCGGCTGCGGCGAAAGCTTCAACGTCTGAGGCCGGC
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DNA Sequence for Gene |
>AJ76_02930
|hscB
GTGGGTAAACCCTGTCATTTCGCCCAGTTCGACCTGCAACCGGCTTTCCTGGTCGATCTCGACGAGCTCGGCCAGCGCTATCGCGAGTTGGTGCGCAGCG TCCATCCTGACCGTTTCGCCGACGCTCCCGAGCGCGAGCAGCGTCTCGCCCTGGAACGCGCGGCGCAACTGAACGAGGCCTACCAGACCCTGAAGAGCGC TCCGCGCCGGGCCCTGTACCTGTTGACCCTGAGTGGTCACGAGTTGCCCTTGGAGGCTACGGTGCAGGATCCGGAGTTTCTCCTGCAGCAGATGCAGCTG CGCGAGGAGCTGGAGGAGTTGCAGGACAGCGCCGACCTGGCCGGCGTGGCGACTTTCAAGCGTCGGCTCAAGGCCGCCCAGGCCGAGCTGGAGCGTGAGT TCGCCGCGTGCTGGGACGATGCGCAGCGCCGCGAAGAGGCCGAACGCCTGGTCCGTCGCATGCAGTTCCTCGACAAGCTCGCGCAGGAAGTGCGCCAGCT GGAAGAGCGACTCGACGATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCCTGCGGCCCCCGGGCCGCACCCCATAGTTAAGACAGAGCATGGCCCTACTGCAGATCGCCGAGCCCGGTCAGAGTCCCAAGCCCCATGAGCGTCGCT TGGCGGTTGGGATCGACCTGGGTACCACCAATTCGCTGGTCGCCGCGGTGCGTAGCGGCGTCGCCGAGCCCTTGCCGGATGCGCAGGGACGCCTGATCCT GCCTTCCGCGGTGCGTTATCACGCCGAGCGGGCGGAAGTGGGCGAGAGCGCCCGCGCGGCCGCCGCGGAGGATCCCTTCAATACCGTCATTTCGGTCAAG CGCCTGATGGGGCGCGGCCTGGAGGACGTCAAGCAACTGGGCGAGCAATTGCCCTACCGCTTCCGCCAGGGCGAGTCGCACATGCCCTTCATCGAGACCG TACAGGGGTTGAAGAGTCCTGTGGAAGTCTCGGCGGACATCCTGCGTGAGCTGCGCCAGCGCGCCGAAACCACCCTCGGTGGCGAGCTGGTGGGTGCGGT
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Amino Acid Sequence |
>molecular chaperone HscB
MGKPCHFAQFDLQPAFLVDLDELGQRYRELVRSVHPDRFADAPEREQRLALERAAQLNEAYQTLKSAPRRALYLLTLSGHELPLEATVQDPEFLLQQMQL REELEELQDSADLAGVATFKRRLKAAQAELEREFAACWDDAQRREEAERLVRRMQFLDKLAQEVRQLEERLDD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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