Pseudomonas aeruginosa BWH036, AJ76_02871
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH036 adTyH-supercont1.8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTCTAGCGCTGCGTCCTGCCCATGCTCCAGCCGCCAGACCGAACGGCGGGCGATAGTCGGACAGGCCCTTTGATCATGACCGCCACGGTCGCGATACGGA ATCGCGCTCAGCCGCTACTTCCGCCCCACTGTTTCCGCCGCTTCCGCTGCCGAGCCCATTATCACCGGAGTTTTTCCTACAGCAGTCCTCCCAGTCCCCT ACGAAAACCAAGAAGTTCTACCGGCCAAAGCCAGAAAACTACGATTGTCGCCGTTTCAGCCTCGCCTCAGGCTATCGCCCACTCGACTCTCCGCCTTGAA ACCGATCGTTCTGCACATGCCTGCGGATATCGGCTTCTTTTCTCTGCAAGAACCGCGCTCCGGGCCGATTGACCATGCATCCAGCTTTTCCGCGTAACCA GGCTAGCCTTTCTTTCCCACCTCCCTCTCCAAAACCTTCCGGCAGTTCCACTTCGATTGTTCCATCCCTCAGGGCCGGACCGCTGCTCCGTACGGGCCTC
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| DNA Sequence for Gene |
>AJ76_02871
ATGGGAATGGCCATGTTGTCGTCCTGCCTTGCCAATGCCGCCCCGGATGCGGGGCAGGCGCTGCGTGACGTGGAAAGCCGACGCCTGAACCTGCCCGCGC CGGTGGAACTGGACGCCGAGCGCCCCAGCCCCGAGGACGGCGTATCACGGGCTGCCGAAGAGGGCGGCCCGACGGTGCTGGTCAAGCGCTTCCAACTCAG CGGCAACAGGCAGTTCGACGATCGATGCCTGCTGGCGCTCCTGCACGACCTGCCGGGCCAGGAACTCAATCTGAGCCAATTGCACGCCGCCGCCGCCCGC ATCGGCGATTTCTATCAGGAAAAGGGATATGTGCTGGCGCGCGCCTTCCTCCCGGCACAGGAAATCCAGGATGGAACGGTACGCATCGAAGTGCTCGAGG GACGCTACGGCAGGATCGAACTGCACAACACGTCCCGAACGCTGGACCGCGTTCTACTCCGCCCCTTGAGCGCACTCGAACGAGATACCGCGGTCCAGGG CTCGGAGCTGGAGCGTGCGCTTCTGCTCCTGAGCGACATTCCCGGCCTCCAGGCCAAAGGCACCCTGCTGCCGGGCCAGGCGCAGGGAACCACGGACTTG CGCGTCGAGGCCCGCCCCGGCCCGCTGGTCGGCGGCAGGCTGGAGGCAGACAACTATGGCGGCCGCTACATGGGGGAATATCGCCTGGGAACCACCCTCG ACTTCAACAGCCCGCTGCGACTGGGCGACCAGGCGAGACTGAGCCTGCTGGGCAGCGACCGGCACCAACGCTACTACCGTGCAGCCTATCAACTGCCCCT TGGTTCCCGAGGCACGCGCATCGGACTGGCCCACGCCGAGACGACCTATCGACTGGTACGCGATTTCTCGCGCCTGGACGCCCATGGCCGGGCCATTACC GACAGTCTGTTCGTCAGCCAGCCCCTGCTGCGTAGCCGCAGCTTAAGCCTGTCCACCCAGTTGCAATATGAAAACAAGCGACTTCGCGATGACCAGGAGC GTACCGGGAGGCATAGCCGCAAGGAGATCCGCCTGTGGACCGCCAGCATCAGCGGAAACGCCCAGGACCGCTTGTTCGGCGGTGGACAGAGCGGCTTCTC GCTGGCCTATGCCCACGGCCAGCTCGCCATCGACTCCGGCGAAGAGCGGCTGCTGGACCGCTACACCATCGGTACCGCCGGCAGCTTCGACAAGATCATG CTCAACGCCGTACGCCTGCAGCACCTGGGCGACCGCCTGCAGTTGTTCGCCCAACTCAACGCCCAGTGGAGCGGCGGCAACCTCGACAGCGCGGAACAGT TCGACATGGGCGGCCCCTACGGCGTTCGGGCGTTCCCCCTGGGCAGCTACAAGGGCTACGGCGACGAAGGCTGGCAAGCCAGTGCGGAGCTGCGCTACAG CCTGGCTCCGGGCTGGCAGCTGAGTTCGTTCGTCGACCAGGGCGCGGTGAAATTCCTCAAGCACCCCAACACCACGGAAGGCAATCGCAACCGCATGGCC GCCGTCGGCAGCGGCGCAACCTGGTACGGAACGGATCACCAGGTCAGCCTGACCGCCGCCTGGCCCCTGAGCCAGGAAAACAACATCGAGCCCGAGCGCA CTCCCCGGCTGTGGTTGCAAGCGACCCGCTACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAAGCTCCCGCCCGCCATGCCGGCGGGCCCCACTGAAAGGAAAAGCCATGAACAAGAGCTATACGCTGGTCTGGAACCAGGCCACAGGCTGTTGGAACG TCGCAAGCGAAGGTACCCGTCGGCGCAGCAAGAGCGGACGCGGCAAGGCGCTCGTAGTCGCCGGAGCGTCACTGCTCGGCCTGTTCTGCCAGGCCCCCGC CTTCGCCCTGCCCAGCGGCGCCACGGTCGTTTCAGGCGATGCCGGATTCCAGACATCCACCGATGGCCGGCATATGGTCATCGACCAGCAGAGCCACAAG CTGATCACCAATTGGAACGAGTTCAGCGTCCGTGCCGATGAGCGGGTCAGCTTCCACCAGCCGGGCCAGGACGCCGTCGCCCTGAACCGGGTGATCGGCC GCAACGGCAGCGATATCCAGGGGCGGATAGATGCCAACGGCAAGGTCTTCCTGGTCAATCCCAACGGCGTGGTCTTCGGCAAGTCCGCCCAGGTCAATGT
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| Amino Acid Sequence |
>membrane protein
MGMAMLSSCLANAAPDAGQALRDVESRRLNLPAPVELDAERPSPEDGVSRAAEEGGPTVLVKRFQLSGNRQFDDRCLLALLHDLPGQELNLSQLHAAAAR IGDFYQEKGYVLARAFLPAQEIQDGTVRIEVLEGRYGRIELHNTSRTLDRVLLRPLSALERDTAVQGSELERALLLLSDIPGLQAKGTLLPGQAQGTTDL RVEARPGPLVGGRLEADNYGGRYMGEYRLGTTLDFNSPLRLGDQARLSLLGSDRHQRYYRAAYQLPLGSRGTRIGLAHAETTYRLVRDFSRLDAHGRAIT DSLFVSQPLLRSRSLSLSTQLQYENKRLRDDQERTGRHSRKEIRLWTASISGNAQDRLFGGGQSGFSLAYAHGQLAIDSGEERLLDRYTIGTAGSFDKIM LNAVRLQHLGDRLQLFAQLNAQWSGGNLDSAEQFDMGGPYGVRAFPLGSYKGYGDEGWQASAELRYSLAPGWQLSSFVDQGAVKFLKHPNTTEGNRNRMA AVGSGATWYGTDHQVSLTAAWPLSQENNIEPERTPRLWLQATRYF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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