Pseudomonas aeruginosa BWH035, AJ75_06159
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH035 adTzL-supercont1.44, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCGCCAGCATCACCTTCTTCATCCTTACCGTGCGTCGCCGCTGGCTGCTCCAGGAACTGCGCGCCGTCGAACGCGCGCGGGAGGCCGGCTGATGCGCT TCCTCGAACACGACGAGGCGGACGACCCGATCCTCTCGATGGTCAACCTGATCGACCTGTTCCTGGTGGTGATCGGCATCCTCCTGATCGTCATCGTGCA GAACCCGCTCAACCCATTCAGCCAGGACAAGGTGGTGGTGGTCGAGAATCCCGGCGAGGCGGACATGCGCATGCTGGTCAAGGACGGCAAGGAGCTGAAG CGCTACCAGGCCAGCGGCGAGATCGGCGAAGGGCAGGGCAGCCGCGCCGGGGTGACCTACCGCCTGGCCGACGGACGGATGATCTACGTGCCGGAGAGCG GCGGGGAGGCCGGCAAGTAGCGACGCGTACGGCGGAGAGCTGGGACTTTTGCCCGGAGTTCCCGGATAATGGCCGGTTTCCGTTTCTCTTGGTGCTCGCC
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| DNA Sequence for Gene |
>AJ75_06159
GTGGAAGTAAAGGTCAATTTTCTCGATAACCTTCGACTGGAAGCCAGGTTCGATGATTTCACGGTGATCGCCGACCAGCCGATCCGCTACAAGGGCGACG GCTCCGCGCCGGGGCCGTTCGACTACTTCCTGGCGTCGTCGGCGCTGTGTGCCGCCTACTTCGTCAAGCTGTACTGCCAGACGCGCAACATCCCCACCGA CAACATACGCCTGTCGCAGAACAACATCGTCGACCCGGAGAACCGCTACCGGCAGATCTTCAAGATCCAGGTGGAACTGCCGGCCGACATCTCGGAGAAG GACCGCCAGGGCATCCTCCGCTCCATCGACCGTTGCACGGTGAAGAAGGTGGTGCAGACCGGACCCGAGTTCGTCATCGAGGAGGTCGACAACCTCGATG CCGACGCCCAGGCGCTGCTGATGCCCGGCACCGATGCCGCCGGCTGCACGCGCATCCCGGGCAAGGACCTGCCGCTGGAGCAGACCATCGCCAACCTGTC GGCCATCCTCGCCGGCCTCGGCATGAAGATCGAGATCGCCTCCTGGCGCAACATCGTGCCCAACGTCTGGTCGCTGCACATCCGCGATGCGCAGTCGCCG ATGTGCTTCACCAACGGCAAGGGCGCGAGCAAGGAAAGCGCGCTGGCCTCGGCGCTGGGCGAATTCATCGAGCGGCTGAACTGCAACTTCTTCTACAACG ACCAGTACTGGGGAGAAGAGATCGCCAATGCGGCGTTCGTCCATTACCCGGACGAACGCTGGTTCAAGCCCGGCCGCGACGATGCGCTGCCGCTGGGACT GCTCGACGGCCATTGCCTGGCGATCTACGACCCCGACGGCGAGCTGCGCGGCTCGCACCTGTACGACATCAACTCGGGCAACGTGCAGCGCGGTATCTGC GCCTTGCCCTTCGTGCGCCAGTCCGACGGCCAGGTGGTGTATTTCCCCTCCAACCTGATCGAGAACCTCTACCTCAGCAACGGCATGAGCGCCGGCAATA CCCTGGCCGAGGCGCAGGTGCAGTGCCTGTCGGAGATCTTCGAGCGTGCGGTCAAGCGGCAAATCCTCGAAGGCGAGCTGGCGCTGCCGGACGTGCCGCC GGAGGTGCTGGCCAAGTACCCGGGCATCCTCGCCGGGATCCGCGGCCTGGAAGAGCAGGGCTTCCCGGTACTGGTCAAGGACGCCTCGCTGGGCGGCGAA TTCCCGGTGATGTGCGTGACCCTGATGAATCCGCGCACCGGCGGCGTGTTCGCTTCCTTCGGCGCCCACCCGAGCTTCGAGGTGGCCCTGGAGCGCAGCC TGACCGAACTGCTCCAGGGGCGCAGCTTCGAAGGCCTGAACGACCTGCCCCAGCCGACCTTCGAAAGCCATGCGCTGACCGAGCCGAACAACTTCGTCGA GCATTTCATCGATTCCAGCGGCGTGGTGTCCTGGCGCTTCTTCAGCGCCAAGGCCGATTTCCCGTTCGTCGAGTGGGACTTCACCCGGCAGGGCGAGGCT GCCAACGCCGAGGAAGCCGCGACCCTGTTCGGCATCCTCGAAGCCATGGGCAAGCAGGTCTACATGGCGGTGTACGAGCACCTCGGCGCTACGGCCTGCC GGATCCTGGTGCCGGGCTACTCGGAAATCTATCCGGTGGAAGACCTGATCTGGGACAACACCAACAAGGCCCTGGCGTTCCGCGAGGACATCCTCAACCT GCACCGCCTCGACGACGCAGCGCTCGGGGCGTTGCTGGAGCGCCTGGAAGACTGCGAGGTGGACGACTACACCGACATCACCACGCTGATCGGCGTCGAG TTCGACGACAACACGGTCTGGGGCCAACTGACCATCCTCGAGCTGAAAGTGCTCATCGGCCTCGCCCTGAAGCGCTTCGAAGACGCCAAGGAAGGCGTGG AGGCGTTCCTCCAGTACAACGACAACAGCGTCGAGCGCGGCCTGTTCTACCAGGCGCTGAACGTGGTGCTGGAGGTCGTCCTCGACGACGAGCTGGAGAT CGCCGACTACGAGGCCAATTTCCGCCGCATGTTCGGCGACGCGCGGATGGATGCCGCGCTGGGCTCGGTGGACGGCAGCGTGCGCTTCTTCGGCCTGACG CCGACCAGCATGAAGCTGGAAGGGCTCGACCGGCACCTGCGGCTGATCGACAGCTACAAGAAGTTGCACGCGGCGCGAGCCAGGATGCAGCCCGTGGTCG ACGGCGAGGCCGGCGCTGCCGCGGCTGGCGGTCTCAAGCCTCGGCGCATGGCGATCCGCAAGCGCAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGGGCGCCGAGGTCAGGGCGCGAGGATGATCATGAGGGAAACTTGATTTCATCACGAAGAAATTGAGTTTGTCTCATGGCATGAGCCTCACGAGAATT CCTCCATCGACCTTTCGACTGGAGGAACACCCATGGCCCTGGCCCACACTCTCGGCTTCCCACGCATCGGACGCGATCGCGAACTGAAAAAAGCCCAGGA AGCGTTCTGGAAGGGCGAGCTGGACGAGGCCGGCCTGCGGGCCGTCGGTCGGCAGCTGCGCGCTGCCCACTGGCAGGTACAGAAGGATGCCGGCATCCAG TTGCTGCCGGTCGGCGATTTCGCCTGGTATGACCAGGTGCTGACCCATTCGCTGACCTTCGGCGTGATCCCCGAGCGCTTCCGGGCGCACGGCGAGGCCG GGCCGACCCTGCATACCCTGTTCGGCATGGCCCGTGGCGTCAGCGACGACAGTTGTTGCGGCGGTGCCCATGCCCAGGAAATGACCAAGTGGTTCGACAC
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| Amino Acid Sequence |
>protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO
MEVKVNFLDNLRLEARFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQTRNIPTDNIRLSQNNIVDPENRYRQIFKIQVELPADISEK DRQGILRSIDRCTVKKVVQTGPEFVIEEVDNLDADAQALLMPGTDAAGCTRIPGKDLPLEQTIANLSAILAGLGMKIEIASWRNIVPNVWSLHIRDAQSP MCFTNGKGASKESALASALGEFIERLNCNFFYNDQYWGEEIANAAFVHYPDERWFKPGRDDALPLGLLDGHCLAIYDPDGELRGSHLYDINSGNVQRGIC ALPFVRQSDGQVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKRQILEGELALPDVPPEVLAKYPGILAGIRGLEEQGFPVLVKDASLGGE FPVMCVTLMNPRTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFESHALTEPNNFVEHFIDSSGVVSWRFFSAKADFPFVEWDFTRQGEA ANAEEAATLFGILEAMGKQVYMAVYEHLGATACRILVPGYSEIYPVEDLIWDNTNKALAFREDILNLHRLDDAALGALLERLEDCEVDDYTDITTLIGVE FDDNTVWGQLTILELKVLIGLALKRFEDAKEGVEAFLQYNDNSVERGLFYQALNVVLEVVLDDELEIADYEANFRRMFGDARMDAALGSVDGSVRFFGLT PTSMKLEGLDRHLRLIDSYKKLHAARARMQPVVDGEAGAAAAGGLKPRRMAIRKRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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