Pseudomonas aeruginosa BWH035, AJ75_05980
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH035 adTzL-supercont1.40, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
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| DNA Sequence for Gene |
>AJ75_05980
GGCTACCGTGGCAACGGCCGCGCCACCAGCCTCGGCGACTTCGCCCTGAACGCCGCCAGCCTCGACCTCGGCAATGCCGCCAGCCTCGCCGGCGGCGCCA ATGTCACGCTCGGCGCCGGCAACCTGCTGGTCAACCGTGGGCGGATCACCGCCGCCGGCGACCTCGTGGCCAGCGCCGCGAGCCTGAACAACTACGGCAC CCTGGGCGGCGGCGGCAACCTGCGATTGAACGCGCCCGCCCTGCTCAACGAGCGCGGGTTGCTGTTCAGTGGCGCCGACATGACCCTGCGCGCCGGCGAC ATCACCAACCTCTACGGGGATGTGTACAGCCTCGGCAGGCTGGATATCGCCCGCGACGATGCGGGCAACCGTGCCGCCAGCCTGCGCAACCTTTCCGGGG TGATCGAGAGCGGCAAGGACTTCAGCCTGCGTGCCAGCCTGATCGAGAACCGTCGCGCCGTGCTGGAAAGCAAGTCGGGCCTGTACACCGCGAAGATGGA GCAGACCGCCTGCATCGAAGGCGTCAACGCGGGCGACTGCAGCGGCAAGCGCAACGCCATCTGGACCATCACCCAGCGCGACAAGACCGAGGTCACCGCC AGCAGCGCCATGGGGCAACTGCTGGCCGGAGGCGACTTCGCCATCGACGGCGGCACCCTGAACAACCTTTCCAGCCTGATCGGCAGCGGCGGCAACCTCA CCGCCAACCTCGAAGTCCTCGACAACCAGGGCCTGGAAACCGGCGAGCTGGAAACCATCCGCGTGCTGCGTACCGCTCGCGGCGGCGATATCGGCGGCAT CGACCAGAAGTCGCGCAACTTCACCAACCTCTACTGGTACCAGAGCGCCAATTTCGACCCGGCGCGCGCGGGCGAGATTCCCGCCGCGCTCAACGCGATC CTCAGCGACTGGTCCTTCGAGTACGAATTCCCGAGCAAGGGGCCGACCCCGATCAGCAGTGGCGACCAGTCCTACGCAGCGGTGATCCAGGCCGCCGGCG ACGTCACGGTCAATGCCAGCACGCGCATCGACAACGGCGTCACCCGCCCCGGCTACACCTTCGTCGGCAGCGGCCGCCAGGTGGGCGACAGCGCGGTGGG CGGCAGCGGGGTTTCGGTGGTCGTGCCGCTGACCTCGCAACTGCCGCCCGACCTGGCGCGGCGCCAGGTCAACCCGGTTACCCTGCCCGGCTTCAGCCTG CCCCAGGGCGACAACGGCCTGTTCCGTCTCAGCTCGCGCTTCGCCGAGGACGGCAACGGCAGCGCCGCGCTCGGTGCCGGCGCCGATCGCACCCAGGGCG GTAGCGGCGTCTCGGTCGGCCAGCAAGGCGCCGGCAACGTCGCCGGTACCTGGCAAGGCCAGGGCGTGCGAGTCGACGGCCTGGCTGGCGCGGCGAACGT CCAGGGTCAGGGTGGCAGCGCGCTCGGCGGAAGCCTGCCGGACGTCGCCCGGGTCCAGGGCGTGCCCGGCAACGCCACGCCGAGCGCCAGCCACAAGTAC CTGATCGAGACCAACCCGGCGCTCACCGAACTGAAGCAGTTCCTCAACTCGGACTACCTGCTCAGCGGCCTGGGCATGAACCCGGACGATAGCAAGAAGC GTCTCGGCGACGGTCTCTACGAGCAGCGGCTGATCCGCGACGCGGTGGTGGCGCGCACCGGCCAGCGCTACATCGACGGGCTGAGCAGCGACGAGGCGCT GTTCCGCTACCTGATGGACAACGCCATCGCTTACAAGGACCAACTGCACCTGCAACTGGGTGTGGGCCTGAGCGCGGAGCAGATGGCGGCGCTGACCCAC GACATCGTGTGGCTGGAAGAGGTCGAGGTGAACGGCGAGAAGGTCCTCGCGCCAGTGGTCTACCTGGCCCAGGCGGAGGGTCGGCTGGCACCCAACGGTG CGCTGATCCAGGGCCGCGACGTGAAGCTGGTGAGCGGCGGCGACCTGCATAACGTCGGTACCCTGCGCGCGCGGAACGACCTCTCGGCGACGGCCGACAA CCTCGACAACAGCGGCCTGATCGAGGCCGGCAAGCGCCTCGACCTGCTCGCCGGCGACTCGATCCGCAACCGCCAGGGCGGGGTCATCGCCGGGCGTGAT GTGAGCCTCACCGCGCTGACCGGCGACGTGATCAACGAACGCAGCGTGACCCGCTACGACAGCGCGCTCGACGGCCGCACCTGGGAGCGCAGCTTCGCCG ACAGCGCCGCGCGGGTGGAGGCGGCGAACAGCCTGAACGTCCAGGCCGGACGCGACATCGCCAACCTCGGCGGGGTGCTGCAGAGCCGCGGCGACCTCAG CCTCGACGCCGGACGCGACGTCACCGTCGCCGCCGTCGAGGACCGCCAGGGCCAGACCCGCTGGAACACGTCGCGGCTACAGAGCGTGACCCAGCTCGGC GCCGAAGTCAGTGCCGGGCGGGACCTGAACGTCAGCGCCGGGCGCGACCTCAGCGCAGTGGCCAGCGCCCTCGAAGCGCGCCGCGACATCGCCCTCTCCG CCGGGCGCGACGTGACCCTGGCGGCGGCGGCGAACGAGGAGCATGCCTACAGCAAGACCAGGAAGGTCACCTACCAGGAAGACAAGGTTGCCCAGCAAGG CACCCGCGTGGACGCCGGCGGCGACCTGGCGATCAATGCCGGACAGGACCTGCGCCTGATCGCGAGCCAGGCCAGCGCCGGCGACGAGGCCTACCTGGTG GCCGGCGACAAGCTGGAACTGCTGGCCGCCAACGACAGCAACTACTACCTGTACGACAAGAAGAAGAAAGGCGACTTCGGCCGCAAGGAAACCCGGCGCG ACGAAGTCACCGACGTCAAGGCGGTGGGCAGCCAGATCAGCAGCGGCGGCGACCTCACCCTGCTCAGCGGCGGCGACCAGACCTACCAGGGCGCGAAGCT GGAATCGGGCAACGACCTGGCCATCGTCAGCGGCGGCGCGGTGACCTTCGACGCGGTGAAGGACCTGCACCAGGAGAGCCATGAGAAGAGCAAGGGCGAC CTGGCGTGGCAGTCGTCGAAGGGCAAGGGCCAGACCGACGAAACCGTGCGCCAGAGCCAGATCGTGGCCCAGGGGAATCTGGCGATCAAGGCCGTGGAAG GGCTGAAGATCGACCTCAAGCATATCGACCAGAAGACCGTGAGCCAGACCATCGACGCGATGGTGCAGGCGGATCCGCAACTGGCGTGGCTGAAGGAGGC CGAGCAGCGCGGGGATGTGGACTGGCGCATGGTGCAGGAGGTGCACGATAGCTGGAAGTACAGCAACTCGGGGCTGGGGGCTGCGCCGTCACTGGCCATT GCCATCGTTGCGGCTGCTTACCTCGGCCCGGTGTATGGCCCTATGGCCAGCAATCTTGCCGTTGGCACCATCAATAACGGTGGCGACCTTGGCAAAGGGC TGCAACACGCCACCAGCTCCAGTGCTCTCAAGAGCTACGCCATCGCGGCGGCCACGGCTTACTTGACCACCGAGTACTTCGACAAGGTGCTGGACACCAA GACCAACGTCGATACCAGCAAGGTCACGGTGGACCTGAGTACCGTCAGCGGTGCCAGTCGCTTCGCCGCCAACCAGGCGATGCAGAACCTCACCAGCACG GCCTTGGGTAAGGCTATGGGACAGGGTGGCAGCTTCGGCGATGCCCTCAAGGACAGTCTCTACAATACCTTTGCTGCCGCCGGCTTCAACGCCATTGGTG ACTTCGGCAAGACCCACAAGCTGGAAACCGGAAGCGCGCAAATGGTGGTGATGCATGCGCTGATGGGGGGCTTGGCCGCCCAAGCGCGTGGCGACAGCTT CGCTGCTGGAGCGATTGGTGCAGGACTCAACGAAGCACTGGTGAAGGACCTGGACAAACTGGTCAGCAGCTACTCGCCGGAAAATCGCGAGGCGATGCTG GCCATGGCCTCGCAACTGACGGGGCTGGTCGGGGTAGTCGCGAAGGACCCCGGTGCCAGTTACAAGGAGCTTGAAACGGGGAGTTGGGCGGCGAGGAATT CTGTCCAATACAACTACCTAAACCACGAAGAAAACCAGGAACGCTTCGAGGCCAAGAAGGCATGTAACGGCGGAGACTCAACCGCTTGTGGCCGCGTCGA TGAATTAAACCAACTCGACCGGAGTCGCGATCTGGCACTACTTACGGCCTGTTCTTCGGACGGTAGTAGCACGACATGTACAGCGCTGCGTAAAGAGGCT TGGGAATCTGCCCAGAGTTTGAAACAGGCCAGTTGGACTCCAGAAGCACAAGAGCAGTACCGGCAAGCCATGCAGAACCCGCAACTGATGGCATACACCA TTGAGGGCGAGCTGCGCAGCATCTACCAGATCAACGACCCGATAACGGCAGCTGATTCCAAGCGGCTGGCCGAGGCGATGGCCAGCTTGGGTTCTGACTT CATCCCAGGTTATGGCGATGGCAAGGCGTTTGTCGAAGCGCAAGACCCCTTCGACTATACGATGGCCGGAATAGGCTTGGTGCCGGGCATTGGGGATGGC GCTGCGAAGATCCTGGCCAAGGCGAAGGCACTTTACAAGGAAGGTAAAGTATCCGAGGCTGCTGATTTGGTCGAGGGACTGGGTAAGCTGCCGGCTCCGC AAGGGCCAAAAGGAACTGGAACGGCGCTG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGTGAAGTAGAAGTTAGCTCTGGCAGCAAAGGGTCATGGACTAAGGAACTCAACAAACCAGAGCCGAACACGATTTATAAAGTGGACGGGAACAAGACCT ATCAGACAGATAGTCTTGGGCGTGTTGAGAAGGTTGAGTCCAACCTCTCGCTGACGAAGAGTGACCGGAATACTTATCAGCAGTGCATTGCTGGTAAATG CGGGGTTAGTGGCGATGAAGGTGGCCATCTGATTGCAAGTATCTTCAATGGGCCAGGTGAGAAGCTGAACCTGCTTCCCATGAATGGGAACTTGAATAAA GGTGCCTGGAAGTCCATGGAGAACACTTGGTCATCTGCGCTCAAGCAAGGGCAGATGGTCAGTGTGAAAATTGAGCCTGTCTATTCTGGCTCATCTGTGC GTCCTGATAGATTTACTGTCAGATACTCTATTGATGGTGGTCGCCCTGTCATTGTCGATTTCAAAAACTCACCGGGTGGTATTTGATGGGCGATCAAGAG
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| Amino Acid Sequence |
>hemagglutinin
GYRGNGRATSLGDFALNAASLDLGNAASLAGGANVTLGAGNLLVNRGRITAAGDLVASAASLNNYGTLGGGGNLRLNAPALLNERGLLFSGADMTLRAGD ITNLYGDVYSLGRLDIARDDAGNRAASLRNLSGVIESGKDFSLRASLIENRRAVLESKSGLYTAKMEQTACIEGVNAGDCSGKRNAIWTITQRDKTEVTA SSAMGQLLAGGDFAIDGGTLNNLSSLIGSGGNLTANLEVLDNQGLETGELETIRVLRTARGGDIGGIDQKSRNFTNLYWYQSANFDPARAGEIPAALNAI LSDWSFEYEFPSKGPTPISSGDQSYAAVIQAAGDVTVNASTRIDNGVTRPGYTFVGSGRQVGDSAVGGSGVSVVVPLTSQLPPDLARRQVNPVTLPGFSL PQGDNGLFRLSSRFAEDGNGSAALGAGADRTQGGSGVSVGQQGAGNVAGTWQGQGVRVDGLAGAANVQGQGGSALGGSLPDVARVQGVPGNATPSASHKY LIETNPALTELKQFLNSDYLLSGLGMNPDDSKKRLGDGLYEQRLIRDAVVARTGQRYIDGLSSDEALFRYLMDNAIAYKDQLHLQLGVGLSAEQMAALTH DIVWLEEVEVNGEKVLAPVVYLAQAEGRLAPNGALIQGRDVKLVSGGDLHNVGTLRARNDLSATADNLDNSGLIEAGKRLDLLAGDSIRNRQGGVIAGRD VSLTALTGDVINERSVTRYDSALDGRTWERSFADSAARVEAANSLNVQAGRDIANLGGVLQSRGDLSLDAGRDVTVAAVEDRQGQTRWNTSRLQSVTQLG AEVSAGRDLNVSAGRDLSAVASALEARRDIALSAGRDVTLAAAANEEHAYSKTRKVTYQEDKVAQQGTRVDAGGDLAINAGQDLRLIASQASAGDEAYLV AGDKLELLAANDSNYYLYDKKKKGDFGRKETRRDEVTDVKAVGSQISSGGDLTLLSGGDQTYQGAKLESGNDLAIVSGGAVTFDAVKDLHQESHEKSKGD LAWQSSKGKGQTDETVRQSQIVAQGNLAIKAVEGLKIDLKHIDQKTVSQTIDAMVQADPQLAWLKEAEQRGDVDWRMVQEVHDSWKYSNSGLGAAPSLAI AIVAAAYLGPVYGPMASNLAVGTINNGGDLGKGLQHATSSSALKSYAIAAATAYLTTEYFDKVLDTKTNVDTSKVTVDLSTVSGASRFAANQAMQNLTST ALGKAMGQGGSFGDALKDSLYNTFAAAGFNAIGDFGKTHKLETGSAQMVVMHALMGGLAAQARGDSFAAGAIGAGLNEALVKDLDKLVSSYSPENREAML AMASQLTGLVGVVAKDPGASYKELETGSWAARNSVQYNYLNHEENQERFEAKKACNGGDSTACGRVDELNQLDRSRDLALLTACSSDGSSTTCTALRKEA WESAQSLKQASWTPEAQEQYRQAMQNPQLMAYTIEGELRSIYQINDPITAADSKRLAEAMASLGSDFIPGYGDGKAFVEAQDPFDYTMAGIGLVPGIGDG AAKILAKAKALYKEGKVSEAADLVEGLGKLPAPQGPKGTGTAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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