Pseudomonas aeruginosa BWH035, AJ75_02658
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH035 adTzL-supercont1.9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAGATCGTCGGTGAGGCGCTGGTTCAGGCGCAGCTCTTCGTTGCAATAGAAGCGGCGCTTGTCCAGGCTGGTGAAATCGAGAAAGCCGAAATCCATCGGC TTCTTGATCTTGTAGGCGTAGGGACCGGTCAACAGGACCCAGGAGATGTGCGTCTCGATGACCTCGAAGCGCTCCACCGGGTGGGGGTAGAGGGCCGGGT TCTGCAGGGCGGCGATCAGGGTCTGGCTCACGGGATATCCTTGCCTCTGAAATATGCGAAAACCCGCATTATGGCGGGAAGGGGTGACAGTGCAAACCTC GCTGGCGGATAGCAACCATTTGCCGGATCGCCGGTCGAATGCGCCGCGCTGCCGCCGCGCCTATCCACCGGGGCCGCGCAGACCGTGGATGCCGCCGATG CGGTGTCTGTCCGCTGTGGATAAAGTACGTATAATGCGCCGCCATGACGCGTCCCCGATCCCCCCGTTCCCGTAACAGCAAAGCACGCCCGGCACCCGGC
|
|
| DNA Sequence for Gene |
>AJ75_02658
CTGAACAAATGGCTCGGCTGGGCCCTCAAGCTCGGCCTCGTCGGCCTGGTGCTCCTCGCCGGCTTCGCCATCTATCTCGATGCCGTGGTGCAGGAGAAAT TCTCCGGCCGGCGCTGGACCATCCCGGCGAAGGTCTATGCCCGCCCGCTGGAGCTGTTCAACGGCCTGAAGCTGAGCAGGGAAGACTTCCTGCGCGAACT CGACGCCCTCGGCTACCGTCGCGAGCCCAGCGTGAGCGGCCCTGGAACCGTATCGGTGGCGGCCAGCGCGGTCGAACTCAATACCCGTGGCTTCCAGTTC TACGAAGGCGCGGAACCGGCCCAGCGCGTGCGCGTGCGCTTCAACGGCAACTATGTCAGCGGGCTGAGCCAGGCCAACGGCAAGGAACTGGCGGTGGCGC GCCTTGAGCCGCTGCTGATCGGCGGCTTGTATCCGGCGCACCATGAGGATCGCATCCTGGTCAAGCTCGACCAGGTGCCGACCTACCTGATCGACACCCT GGTCGCGGTCGAGGATCGCGACTTCTGGAACCACCATGGTGTGTCGCTGAAGTCCGTGGCGCGGGCGGTGTGGGTCAACACCACGGCCGGCCAGTTGCGC CAGGGCGGCAGCACCCTGACCCAGCAGTTGGTGAAGAACTTCTTCCTGAGCAACGAACGCAGCCTGAGCCGCAAGATCAACGAAGCGATGATGGCGGTGC TGCTGGAGCTGCACTACGACAAGCGCGACATCCTCGAGTCCTATCTCAACGAGGTGTTCCTCGGCCAGGATGGGCAACGAGCGATCCATGGCTTCGGCCT GGCCAGCCAGTATTTCTTCAGCCAGCCGCTGGCCGAGCTCAAGCTCGACCAGGTGGCGCTGCTGGTCGGCATGGTCAAGGGGCCGTCCTACTTCAACCCG CGGCGTTACCCGGATCGTGCGCTGGCGCGGCGCAACCTGGTGCTCGACGTGCTCGCCGAGCAGGGCGTGGCGACCCAGCAGGAAGTCGACGCCGCCAAGC TGCGCCCGCTCGGCGTGACCCGGCAGGGCAGCATGGCCGACAGCTCCTATCCGGCCTTCCTCGACCTGGTCAAGCGCCAGTTGCGCCAGGACTACCGCGA CGAGGACCTGACCGAGGAAGGGCTGCGCATCTTCACCAGCTTCGATCCGATCCTGCAGGAGAAGGCCGAGACCTCCGTCAACGAAACGCTCAAGCGTCTC AGTGGGCGCAAGGGGGTCGACCAGGTCGAGGCGGCGATGGTCGTGACCAATCCGGAAACCGGTGAGATCCAGGCCCTGATCGGCAGTCGCGACCCGCGCT TCGCCGGCTTCAACCGGGCCCTGGACGCGGTGCGGCCGATCGGTTCGCTGATCAAGCCGGCGGTCTACCTGACCGCTCTCGAGCGGCCGAGCAAGTACAC CCTGACCACCTGGGTGCAGGACGAGCCCTTCGCGGTGAAAGGCCAGGACGGCCAGGTCTGGCGACCGCAGAACTACGACCGGCGCTCGCATGGCACGATC TTCCTGTACCAGGGCCTGGCAAACTCCTACAACCTGTCCACCGCCAAGCTCGGCCTCGACGTCGGTGTGCCCAACGTGCTGCAGACCGTCGCCCGGCTGG GTATCAACCGTGACTGGCCGGCCTATCCTTCGATGCTGCTGGGCGCCGGTTCGCTCAGTCCGATGGAGGTCGCCACCATGTACCAGACCATCGCCAGCGG CGGCTTCAACACGCCGTTGCGGGGGATCCGCAGCGTCCTCACTGCCGACGGCCAGCCGCTCAAGCGCTATCCGTTCCAGGTCGAACAGCGCTTCGACTCG GGCGCCGTCTACCTGGTGCAGAACGCCATGCAACGGGTCATGCGCGAAGGCACCGGGCGTTCGGTGTACAGTCAATTGCCGTCGTCGCTGACCCTCGCCG GCAAGACCGGCACCAGCAACGACTCGCGCGATAGCTGGTTCTCCGGTTTCGGCGGCGACCTCCAGGCTGTGGTCTGGCTCGGTCGCGACGACAACGGCAA GACGCCGCTTACCGGCGCCACCGGTGCCTTGCAGGTGTGGGCCAGCTTCATGCGCAAGGCGCATCCGCAATCGCTGGAAATGCCGATGCCGGAGAACGTG GTGATGGCCTGGGTCGACGCGCAGACCGGGCAGGGCTCGGCGGCGGATTGCCCGAATGCCGTACAGATGCCCTATATTCGTGGCAGCGAGCCCGCCCAGG GCCCAGGCTGCGGGAGCCAGAACCCCGCCGGCGAGGTGATGGACTGGGTACGTGGCTGGCTGAATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCCGAGAGGACCTGACGTGAAGAAGATTTTCGTATTCGCCGCGCTTGCCGGCAGTGCCCTGCTCGCGGGCTGTGCCAGCCCGCAGCATGGGGCGATCCCG GTGGTGGATTCCGGCACTCCGGTTTCCAACCAGGAAAGCGGCGGTTTCCGCATCACCCGTACCCAGGTACCGCGTACCCAGCAAGGCGCCGCCACCCAGG GCATTCCCCAGGGCGGCGACTCCGGCGTGGTGGTGATGGTGCCGCAGGGCGCCAATTCCGCACCGATCCAGACTTTCCCGGCGCAGTCCGGCGCCGCGCC GATCAGCAGCGCTCCGCTCGGCACCGGCACCCAGTACCAGGCTCCGCCCAGCAGCGCCTCCACGCCACCGCTGGGTGGCAGCTACAACATACCGCCCAGC GGCGCCAGTCGTTCCGCGCCCACCGGCATTCCGGCCTCCGGCTCGGCCGGCAGCCTGGCGGCCGACGAGCAGTTGGACGGGCCGGTCCTGGCGATGCTCA
|
|
| Amino Acid Sequence |
>penicillin-binding protein
MNKWLGWALKLGLVGLVLLAGFAIYLDAVVQEKFSGRRWTIPAKVYARPLELFNGLKLSREDFLRELDALGYRREPSVSGPGTVSVAASAVELNTRGFQF YEGAEPAQRVRVRFNGNYVSGLSQANGKELAVARLEPLLIGGLYPAHHEDRILVKLDQVPTYLIDTLVAVEDRDFWNHHGVSLKSVARAVWVNTTAGQLR QGGSTLTQQLVKNFFLSNERSLSRKINEAMMAVLLELHYDKRDILESYLNEVFLGQDGQRAIHGFGLASQYFFSQPLAELKLDQVALLVGMVKGPSYFNP RRYPDRALARRNLVLDVLAEQGVATQQEVDAAKLRPLGVTRQGSMADSSYPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQEKAETSVNETLKRL SGRKGVDQVEAAMVVTNPETGEIQALIGSRDPRFAGFNRALDAVRPIGSLIKPAVYLTALERPSKYTLTTWVQDEPFAVKGQDGQVWRPQNYDRRSHGTI FLYQGLANSYNLSTAKLGLDVGVPNVLQTVARLGINRDWPAYPSMLLGAGSLSPMEVATMYQTIASGGFNTPLRGIRSVLTADGQPLKRYPFQVEQRFDS GAVYLVQNAMQRVMREGTGRSVYSQLPSSLTLAGKTGTSNDSRDSWFSGFGGDLQAVVWLGRDDNGKTPLTGATGALQVWASFMRKAHPQSLEMPMPENV VMAWVDAQTGQGSAADCPNAVQMPYIRGSEPAQGPGCGSQNPAGEVMDWVRGWLN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|