Pseudomonas aeruginosa BWH035, AJ75_01642
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH035 adTzL-supercont1.4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACGTCATCGCCCGCGACGAGAGCGGCTTCAAGGGGCCGGCATTGTTGCAGAACATCCTCGAGAGCGGCCTGCGCTTCGGCGACATGGACATCTTCCATCG CCACGAAAGCATGGCCGGCAATGGCGAGATCCTGTTCTCCATGGCCAATGCGGTGAAACCGGGCACTTTCGACCTGGACGACATCGACAACTTCAGCACC CGCGCCGTGAGCTTCTTCCTCGGCCTGCCGGGGCCGCGCCATCCGAAGCAGGCCTTCGACGTGATGGTTGCCGCCGCGCGCAAGCTGGCCCACGAGCTGA ACGGCGAGCTGAAGGACGAGCAGCGCAGCGTGTTGACCGCCCAGACCATCGAGCACTACCGCCAGCGCATCATCGACCATGAGCGTCGCAGCCTGATGCA GAAGCGCTGATCCGGCCACAGCCCCTTTCTTCGTACGGGAGGGGGCGAACTACTCTATAGAGCAGCCGAGGCTGCTCTTTTCGTTTCACGGACTCCCACC
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| DNA Sequence for Gene |
>AJ75_01642
ATGACCGACACCCAGGCTGCCGCCGAACGCATCGCGCAACTGCGAACCGAACTGGACACCCACAATTACCGTTACTACGTGCTCGACGAACCGAGCATTC CCGACGCCGAATACGATCGCCTGTTCCGCGAGTTGCAGGCGCTGGAGGCCGAGTACCCGCAACTGCTGACGCCCGACTCGCCGACCCAGCGGGTCAGCGG CACGCCGGCCTCGGCGTTCGGCGAAGTGCGCCATGAGATCCCCATGCTCAGCCTCGGCAACGCCTTCGAGGAGCAGGACCTGCTGGACTTCGACCGCCGC GTACGCGAAGGACTGGCCGACCTGTTGCCTGGCGGCGACCTGCTCGGCGGTGGCGCGGAGGTCGAGTACAGTTGCGAGCCGAAGCTGGACGGCCTGGCCG TCAGCCTGCTCTACGAACGCGGCCAACTGGTGCGCGGCGCCACCCGCGGCGATGGCAGCACCGGCGAGGACATCACCAGCAACGTACGCACCATTCGCAA CGTACCGCTGAAGCTGCACGGCGAAGGCTGGCCGGAGATCCTCGAAGTGCGCGGCGAGGTGTTCATGTCCAAGGCCGGTTTCGAGGCGCTCAACGCCAAG GCCGTGGAAACCGGCGGCAAGACCTTCGCCAACCCGCGCAACGCGGCGGCCGGCAGCCTGCGCCAGCTGGATTCGAAGATCACCGCCAGTCGCCCGCTGG AGTTCTGTGCCTACGGCTTCGGCCAGGTCAGCGGGACGCTGCCGGACACCCAGGTGGGCATCCTCGAGGCGTTCCGCGGCTGGGGTATCCCCATCAGTCG CGAGCTGCGCCTGGTCAAGGGCGCCCAGGCCTGCCGCGACTACTACGACGACATCGGTCGCCGACGCGATGCGCTGGCCTACGAGATCGACGGCGTGGTG TTCAAGGTCAACCGCATCGCCTTCCAGCGCGAACTGGGCTTCCGCGCGCGCGAGCCGCGTTGGGCGATCGCCCACAAGTTCCCCGCGCGCGAGGAGCTGA CCGAGCTGCTGGGTGTCGAGTTCCAGGTCGGCCGCACCGGCGCCGTGACCCCGGTGGCACGCCTCAAGCCGGTGCAGGTGGCCGGCGTCACGGTGTCCAA TGCGACCCTGCACAACATGGATGAAGTCGCCCGCCTGGGCCTGCGCATCGGCGATACGGTGGTGATCCGCCGTGCTGGCGATGTGATTCCGCAGGTCATG CAGGTGGTGCTCGAGCGCCGCCCGGCGGATGCGCAGGCTATCGAGGTGCCCGAGCATTGCCCGGTCTGCGGCTCGGCCGTGGAGCGGACCCAGTTGGTCA AGCGCAGCAAGGGCAAGGAGTCGATCAGCGAGGGCGCCATCTATCGCTGCGTCGGCCGCCTCTCCTGTCAGGCGCAGTTGAAGCAGGCGATCATCCATTT CGTATCGCGCCGGGCAATGGACATCGACGGTCTTGGCGACAAGATCGTCGAGCAACTGGTGGATCGCGGGCTGGTCGCCTCGCCGGCGGATCTCTATACC CTGACCTATGAACAGGTGTTCGAGCTGGAAGGGTTCGCCGAGCTGTCCACCAACAACCTGCTGACGGCCATCGCCGATAGCCGCAAGCCTTCGCTGGCGC GCTTCATCTTCGCCCTGGGGATTCCCGACGTCGGCGAGGAAACCGCCAAGCTGCTGGCGCGTTCGCTGGGTTCGCTCGAGCGGATCGGCAAGGCGCTCCC GGAAGTGTTGACCTACCTGCCGGACGTCGGCGCCGAGGTAGCCTACGAGATCCACAACTTCTTCGCCGACGAGCACAACCGCCAGGTGATCGCCCAGTTG CGCGATGCCGAACATGGCGTGCAGTTGCAGGAAGAGGGCGAGGTCGCCGCGGAGTTCGCCGCTTGTGCCTCGCTGGCCGGTTTCATCGACAAGCTGAACA TTCCCTTCATCGCCGCCACCGGCGCGGAAAAGCTGGCCAGCCGCTTCGGTTCGCTCGACGGCATCATCCGCGCCGACTGGCTCGATCTACGCCAGGTGGA GCGTCTGCCCGAGCGAGCGGCGAAAAGCCTGCGCGATTTCTTCGACGAGCCGGCCAACGTGCAGCGTGCCCTGGCCATCGAGGCGCAGTTGCGTGAGTTC GGCATGCATTGGCAGAGCGAGCGCAAGGCGGTCGAAGGCCTGCCTCTGGCCGGGCAGACCTGGGTGCTGACCGGCACCCTGGAGGCGATGAGCCGGGACG TGGCCAAGGACAAGCTGGAAGGGCTCGGCGCCAAGGTGGCCGGCTCGGTGTCGGCCAAGACCCACTGCGTGGTCGCCGGGCCCGGCGCCGGCTCGAAGCT GGCCAAGGCCAACGAGCTGGGCGTGAAGGTGCTCGACGAAGACGGCCTGCTGAAACTGTTCGACGAGCACGGCGTCGCCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCGGCGGCGCTGCTGCGAAAGATTTCCGAAGACTGGAGTTAACGATGGACAAGGCAAGAAAGCAGCGGTTGCTGGGCGTGCTCGCATTGGTGGTGCTGT TCGGCGCCTACGTGGGTTGGAGCGAGCGGCCGCGCATCCTGCTGCATTACAGTGGCCAGGCTTCGGCGCCGATCGCCTACAGCTACAAGGAGCAGGGCGT GGAAACCTTCTCCGGGGAGATCCGGCCCGGCCAGGTCCGCGAGTTTCCGGTGAAGCTGTTCGGCGGCAGCGATTACCGGATCGCCTTCTCCTTCCATCGC GGTGAGGAGAAGTATGCGTCGTTCAGCACCAAGCCGGGCTGGGGCACCCTGGACCTGTATGTCGATACCGAGCTGAGCGTATCGACCCAGCCGCCGCCGG AGGGTCTGATCCAGCAGCAATGAACCGCTTTCGCGAAATGGATTGCAAACGTAAGTGCTTGAAGTGGTTGTAACTTACGCGCAAGCCGGTAGAATGGCGC
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| Amino Acid Sequence |
>NAD-dependent DNA ligase LigA
MTDTQAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRELQALEAEYPQLLTPDSPTQRVSGTPASAFGEVRHEIPMLSLGNAFEEQDLLDFDRR VREGLADLLPGGDLLGGGAEVEYSCEPKLDGLAVSLLYERGQLVRGATRGDGSTGEDITSNVRTIRNVPLKLHGEGWPEILEVRGEVFMSKAGFEALNAK AVETGGKTFANPRNAAAGSLRQLDSKITASRPLEFCAYGFGQVSGTLPDTQVGILEAFRGWGIPISRELRLVKGAQACRDYYDDIGRRRDALAYEIDGVV FKVNRIAFQRELGFRAREPRWAIAHKFPAREELTELLGVEFQVGRTGAVTPVARLKPVQVAGVTVSNATLHNMDEVARLGLRIGDTVVIRRAGDVIPQVM QVVLERRPADAQAIEVPEHCPVCGSAVERTQLVKRSKGKESISEGAIYRCVGRLSCQAQLKQAIIHFVSRRAMDIDGLGDKIVEQLVDRGLVASPADLYT LTYEQVFELEGFAELSTNNLLTAIADSRKPSLARFIFALGIPDVGEETAKLLARSLGSLERIGKALPEVLTYLPDVGAEVAYEIHNFFADEHNRQVIAQL RDAEHGVQLQEEGEVAAEFAACASLAGFIDKLNIPFIAATGAEKLASRFGSLDGIIRADWLDLRQVERLPERAAKSLRDFFDEPANVQRALAIEAQLREF GMHWQSERKAVEGLPLAGQTWVLTGTLEAMSRDVAKDKLEGLGAKVAGSVSAKTHCVVAGPGAGSKLAKANELGVKVLDEDGLLKLFDEHGVAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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