Pseudomonas aeruginosa BWH035, AJ75_RS0106610
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH035 adTzL-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTATACGGGAAACCGTATCGAGGGTTCGAATCCCTCCCTCACCGCCAGATCGCAAGAAGGCCC GGCTAATCAAGTTAGCCGGGCCTTTTTCATTTCCGCACCAATACTTACGGCATTTCCGGCAACATGCTGGCAACTTAGTTGTTACTTGCCACTCCCCGCC AAGTCGATAAGCGCCAGCCACTCCGGCGGAACATTCTCGACAACCCGGCAGCCCTCATCCCCCGCCTCTTGCAGCAACTCTACCCAAGGTCCGGGAAATT GCTTACTTGCGCCGCACGCTGGATATTTTTTGAACAAACGACACTCCAACTACTGCTAAAGTCGGGGGGACTAAAAAAAAAGTTGCTCGGCTTGCGCTTG GTCAGTTTACTTACTACAAGTAATGGGTAGTATGTAGCCGGCTAATTTCCCCGGCTGGGGAGATTGCTGTTATGGAAATGTCCACCTTAAGGGGAACACG
|
|
| DNA Sequence for Gene |
>AJ75_RS0106610
ATGAACAACGTTCTGAAATTCTCTGCTCTGGCTCTGGCTGCTGTTCTGGCCACCGGTTGCAGCAGCCACTCCAAAGAAACCGAAGCTCGTCTGACCGCTA CCGAAGACGCAGCTGCTCGTGCTCAGGCTCGCGCTGACGAAGCCTATCGCAAGGCTGACGAAGCTCTGGGCGCTGCTCAGAAAGCTCAGCAGACCGCTGA CGAGGCTAACGAGCGTGCCCTGCGCATGCTGGAAAAAGCCAGCCGCAAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TAGGTCTCACGACCTGTTGAAAACCGGTCCCTCGGGGCCGGTTTTTTTATGCCTGCGTTTCGCCGGGCATGAAAAAACCCGCGTCCCTTGCGGGTACGCG GGCCTCTGCCTCGACGCTCTCCGTCAGGGCGTAAGCTGGGTAGGATCGCTATCCACCGTCGCGGTCATCGCCGGCGCCGATTCCTGGGCGATTTCCACCG GCACGCCATCCTCCGAGGCCACCACTTCGCGGACCACGTCCCAGTTCAACTGGATACGCTTGGCCAGGTCGTCGCGCTTGAGCAGGGTATTGATCACCGC GGTGTGCTTGTCCACCACCGACGGGTCGCCATGGTCGTTCAGCGGCGTATGCGCCTCCAGGTAGACCTTGCCGTTGCTCACGCCGAACTTGTAGGGCTCG TTGATGATACGCACGCTGGTGCCGACGCTGATCATCGAGAACAGGTGGGTCACGTCGGCGTTGTACATGCGGAAGCAGCCATGGCTGGTGCGGGTGCCGA
|
|
| Amino Acid Sequence |
>Outer membrane lipoprotein OprI precursor
MNNVLKFSALALAAVLATGCSSHSKETEARLTATEDAAARAQARADEAYRKADEALGAAQKAQQTADEANERALRMLEKASRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|