Pseudomonas aeruginosa BWH032, AJ72_05167
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH032 adTys-supercont1.21, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGCGCCTGGGCGCCGACGGCGAAGCGCGCCGGCTGGCCTTCGACGGCCTGCCGGACGCCTGGACCCGCGGCATGCTGATGGCCGACCGGATGCCGCTG GCCGAGGTGCTCGCCGAACTCGCCCGCTACCGTCGCGGCGTACTGCGCTGCGACCCGCAACTGGCCAGGCTGGCGGTGTCGGGCGCCTATCCGCTGCTGG ACCTGCGGCGCACGCTGGGCATGCTGCAGGCCACCTATCCGCTGAAGGTGCGCGGGGTGACCGACTACTGGATCAGCCTGGTGCCGGCGTGACGGCGCGG CCGCCATCCCCGTGGCAACCGCCCCATCGCGTCCACCCCGGCAGGCCGTCCGCCGTTGCGCCGGAACAGGCGTTGCCATCGACATACCGTGCTCCGCAGA AAAATAACCGCCTCGACCTGAGACCTTTTTCCTTCTCGGCTGGCAAGTAGAGGAATCCGCCCCGACCCAAGGTCCGCAGAGACCACGAGGAACCCTGTAC
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| DNA Sequence for Gene |
>AJ72_05167
ATGCCCGTACGCACGCTTCGCCCCCGTTCGCTGTCCCTGGCCATCCACGCCGCCGCCATGACCCTCGCCCTCGCCGGCGCGGCCCCCGCCCTGCTTGCCG CCGAGGCGCCCGCCGCCAGCTCGGCGCGCAGCTATGACATCGCCCCCGGCCCGCTCGGCCGTACCCTGTCGGCCTTCGCCAGCGACAACGGGGTATCCCT GGCGTTCGACCCGGCGCTCACCGAGGGTCGCCGCAGCGCCGTCCTGCGCGGCCGCTACGCGCCGGTCGAGGCGCTGCACCGCCTGCTGCTGGGCAGCGGC CTGGAGTTGCAGCAGCGCAGCGACGGCAGCTACACCCTGGTGCCGGCAGCCACCGATGGCGCGCTGGAACTGCAATCCTCGCTGATCACCGCCCAGGCCG CCGGTGCCGAGACCCTGCCCGCCGAGTACGCCGGCGGCCAGGTGGCCCGTGGCGCGCGCCTGGGCATGCTGGGCAACGCCGACGTAATGGATGCGCCATT CAGCATCACCAGCTACACCGCCAGGACCATCGAGCAGCAGCAGGCGCGCAGCGTCGCCGACCTGCTACAGGCCAACGATCCGTCGGTGCGGGTGGTCGGC GGGCGCGGCGACCTGGTGGACAGCTACACGATTCGCGGCTTCAGCGTGCAGAACGCCGACGTCGCCTTCAACGGCCTCTATGGCCTGCTGCCGTTCTGGC GGGTACCGATCGAATTCGCCGAGCGCGTGGAAGTGCTCAAGGGACCGAACGCCCTGCTCGGCGGGATTTCCCCCGGCGGCAGCGTCGGCGGCACCATCAA CCTGGTGCCCAAGCGCGCCGACGACCAGCCGCTGACCCGCGTCAGCGTCGACTGGACCCAGCGCGGCCAGCTCGGCACTCACCTCGACATCGGCCGACGC TTCGGCGAGAACAACGCCTTCGGCGTGCGCTTCAACGGCGTCTACCGCAACGGCGATACCGCCGTCGACCATCAGAGCCGCGAGTTTCCCATGCTCTCCC TGGGCCTGGACTTCCGTGGCGAGCGCCTGCGCCTGTCCAGCGACCTGCTGTACCAGAAGGAAAGCCTGGAAGGCGTGGTGCGCCCGCTGCTGACCGGCCC GGGAACCACTCACATCCCCCACGCTCCGGACTCGAAGACACGCTTCGGCCTGCGCGATTCCTACCTGGACCAGGAGGATTACTCCATGGTCAACCGCGGC GAGTACGACCTCGCCGACAACCTGACGGCGTTCGCCAGCATCGGCGGTCGCCAGAGCAACTACGAAACCATCGCCGCCAACAGCATCCTCATCGGCAACC AGGGCGATATCGTCAACAGCCTGGCACGCCAGCGCGGCGACCGCCGCACCTATTCCGCCGAGGTCGGCCTGCGCGGCAACTTCGACACCGGCCCGCTCCG CCACGACTGGACGCTCAGCGCCAACCGCCTGCACGAACGGCTGGGCATGGTCTATGCCTTCACCGGGATGCAGCCGGGCAACCTCTACCAGACCTCGCCG CATACGCCGCTGCCGGACTTCTCCAGCCTCGACGGGAGCATTCCGAAGACCAATGAAACCGACCTCGGCGGCGTGGCGCTGGCCGACAGGCTGTCGTTCC TCGAGGATCGCGTGCAGGTCACCCTGGGCGTGCGCCGCCAGCAGATCGAGTCGCGCAACTACGACCAGACCAGCGGCGCGCGCACCAGCCACGACAAGCG GCACGTGTGGACGCCGATGGCCAGCGTGCTGGTCAAGCCGCTGCAGGACCTGTCGCTGTACGCCAACTACATCCAGGGCCTCAGCCAGGGCGAGGCGGCG CCGATGACCGCGGCCAACGCCGGCCAGGTGCTGGCACCATACAAGGCCGAGCAATACGAGATCGGCGCCAAGTACGACCTGGGCGGCTTCACCACCACCC TGGCGCTGTTCGAGATCAGGAAACCGAACGCCTATACCGACGCCAGCAACGTCTTCCGCGCCGACGGCGAGCAACGCAACCGCGGCGTGGAGCTGAGCCT CTATGGCGAACCGCTGGACGGCGTGCGGGTGATGGCCGGCGCCACCTACATCAAGCCCGAGCAGAACAAGACCGGCGACCCTGCCAGCGAAGGCAAGGAC GCGCCCGGCGTGGCCCGTCGCCAGGCCAACCTGGGGGTCAGCTGGGACACCCCGTTCGTCGACGGACTGACCCTCGACAGCCGCTGGATCTACACCGGCT CGGCCTATGTGGACAGCGCCAACGCCCTCGCCGTGCCGCACTGGAACCGCGTCGACCTCGGCGCCGCCTACGCCTTCCAGGTCGCCGGCAAGCCGCTGGT GGCGCGCGCCAACCTGGAGAACGCACTGGGCAAGGACTACTGGACCGCAGCCAACGGCTACCTGTCGATCAGCTCGCCGCGCACCCTTTCCCTTTCCCTC ACGGCGGACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCCGCCCCACCATAACCAGAAACCGCCGATGACCAGCCAATGACCGCGAAAACCCTGCGCACCTGGTACCTGGTGCACAAATGGACCAGCCTGATCTCC ACGATCTTCCTGCTGATGCTTTGCCTCACCGGGTTGCCGCTGATCTTCCACGAGGAGATCGAGCACTACTTCGAGCCGCATCCGCAGCTCGAGCCGCTCA CCGCCGAGTCGCCGCGCATCGACTACGACGACGTGATCGCCCGCGCCCTGGCCGCCCGGCCGGGCGAAGTGGTGCGCTTCCTGGTATTCGAAAAGGACGA CCCGCTGGGCCTGGTGATCAGCGCGCCGAGCCTGGTACCGCCGCCGGAGAACGGCCACATGCAGCCGTTCGACGCGCGCACCGGGGAATTCTTCGACGCA CTGCCGCCGCCGGGCGGCTTCATGTACCTGATGCTGAAGCTGCACACCGACCTGTTCCTCGGCCTGCCCGGCTACCTGTTCCTCGGCCTGATGGGCCTGC
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| Amino Acid Sequence |
>ligand-gated channel
MPVRTLRPRSLSLAIHAAAMTLALAGAAPALLAAEAPAASSARSYDIAPGPLGRTLSAFASDNGVSLAFDPALTEGRRSAVLRGRYAPVEALHRLLLGSG LELQQRSDGSYTLVPAATDGALELQSSLITAQAAGAETLPAEYAGGQVARGARLGMLGNADVMDAPFSITSYTARTIEQQQARSVADLLQANDPSVRVVG GRGDLVDSYTIRGFSVQNADVAFNGLYGLLPFWRVPIEFAERVEVLKGPNALLGGISPGGSVGGTINLVPKRADDQPLTRVSVDWTQRGQLGTHLDIGRR FGENNAFGVRFNGVYRNGDTAVDHQSREFPMLSLGLDFRGERLRLSSDLLYQKESLEGVVRPLLTGPGTTHIPHAPDSKTRFGLRDSYLDQEDYSMVNRG EYDLADNLTAFASIGGRQSNYETIAANSILIGNQGDIVNSLARQRGDRRTYSAEVGLRGNFDTGPLRHDWTLSANRLHERLGMVYAFTGMQPGNLYQTSP HTPLPDFSSLDGSIPKTNETDLGGVALADRLSFLEDRVQVTLGVRRQQIESRNYDQTSGARTSHDKRHVWTPMASVLVKPLQDLSLYANYIQGLSQGEAA PMTAANAGQVLAPYKAEQYEIGAKYDLGGFTTTLALFEIRKPNAYTDASNVFRADGEQRNRGVELSLYGEPLDGVRVMAGATYIKPEQNKTGDPASEGKD APGVARRQANLGVSWDTPFVDGLTLDSRWIYTGSAYVDSANALAVPHWNRVDLGAAYAFQVAGKPLVARANLENALGKDYWTAANGYLSISSPRTLSLSL TADF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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