Pseudomonas aeruginosa BWH032, AJ72_04517
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH032 adTys-supercont1.16, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCGCCAGCCTCGGCGGCGCGCCCTGGTGGAGCTGGCTCGGCGGGCTGTTCGGCGCGGCCTACCTGACGGTGGCGATCCTGGTCGCGCCGCGCCTGGGTG CCGCCACTTTCATCGCGTGCGTGGTGGCCGGGCAGATGCTGGTCTCGGCGCTCTGCGACCAGTTCGGCTGGGCCGGTTTCCCGGTGCGCCGGTTGTCCTG GGAGGGCTATCTCGGCCTGGCGCTGGTGGTGGCGGGGGTATTGCTCCTGCAATGGCGGGGAAGAGCGTGAGGAGAGTGCCGGCGAAGGCTGTCAAGTGGA ATCTGGCCTAGACCAAAATCTTGATCTCAAATTGTGATGAAGTTGGCATGAATAGTTGTTGCAAAGCGTGTTGAAACCAAAGCGTCTTTTTCCCTCACTA GCGTCGTCGGGGTTCGAACAGCTTGCTGCCGAGTGAGCCTGCGGGCGTCATGGATGCGCTCGGCAGCCCTGTGCCACACCCTGACCTGGTGAGTCCCCCG
|
|
| DNA Sequence for Gene |
>AJ72_04517
ATGATTTCGAAAAGCAGAAGAAGCTTCATCCGCCTGGCCGCCGGTACGGTCGGCGCCACCGTCGCCACCAGCATGCTGCCGTCGAGCATCCAGGCGGCCC TGGCGATTCCCGCGCACCGCCGGCATGGCAACCTCAAGGACGTCGAGCACGTGGTGATCCTGATGCAGGAGAACCGCTCCTTCGACCACTATTTCGGCAC CCTCAAGGGCGTCCGCGGCTTCGGCGACCGCATGGCGATCCCGCTGCCCGATGGCCAGCGGGTCTGGCACCAGAAGGGCAGCAAGGGCGAGATCCTGCCC TACCACTTCGACACCAGCACCACCAGCGCCCAGCGCGTCGACGGCACCCCGCACACCTGGCCGGACGCCCAGCAGGCCTGGAACGAAGGGCGCATGGACA AGTGGTTGCCGGCCAAGACCGAGCGTTCCCTGGGCTACTACAAGGAGCAGGACATCGCCTTCCAGTTCGCGATGGCCAACGCCTTCACCATCTGCGACGC CTATCACTGCTCGTTCCAGGGCGGCACCAACCCCAACCGGCTGTTCCTCTGGACCGGCACCAACGACCCGCTCGGCCAGCACGGTGGTCCGGTAACCACC AACGACCACGACAGCAACGGCCCGGTGGAGCAGGGCTACACCTGGACCACCTATCCCGAGCGCCTGCAGGCCGCCGGCATCACCTGGCGGGTCTACCAGG ACATGGCCGACAACTTCTCCGACAACCCGCTGATCGGCTTCCGCCAGTACCGCGCCGCGGCGCCTGACTCGCCGCTGATCGTCAACGGCCTGAGCACCTG GAAGCTCGATGCGCTGAAGCGCGACGTGCTGGCCAACAGCCTGCCGCAGGTGTCCTGGATCGTCGCCCCGGCCAAGTACTCCGAACACCCCGGCCCGTCC AGCCCGATCTGGGGGGCCGAGTACACTTCCTGGGTACTCGACGCGCTGACCGCCAACCCGGAGGTCTGGAGCAAGACCGCGCTGCTGGTGATGTTCGACG AGAACGATGGCTTCTTCGACCACGTCGCCCCGCCGGCCGCGCCGAGCCTGAACAAGGACGGCACGCTGCGCGGCAAGACCACCGCCGACGCCACCCTCGA ATGGCACACCAAGGGCGATATCCGTTATCGCAACCAGCCCTACGGCCTCGGCCCGCGGGTGCCGATGTACGTGATCTCGCCGTGGAGCAAGGGCGGCTGG GTCAACTCCCAGGTGTTCGACCACACCTCGGTGATCCGCTTCCTGGAGCAGCGCTTCGGGGTCATGGAGCCGAATATCAGTCCCTGGCGTCGTGCCGTCT GCGGCGACCTGACCTCGGCGTTCAACTTCGCCAACCCGAACAACGAGCCGTTCCCCGAACTGCCCGACACCAGCCAGGCCGACGCCATCGTCGCCAGCCA GATCAAGCTGCCGAAGCCGAAGCCGCCGGCGGTGGCCGCCATGCCCAAGCAGGAAATGGGCATCCGTCCGGCCCGCGCCTTGCCCTACGAGCTGGGCGTG CATGCGCGCTACCGCAGCGGCGGAGATGCGCTGAGCCTGACCTTCGCCAACACCGGCAAGGCCGGCGCGGTGTTCCAGGTGTTCGACCTGCTCGACAGCG AGAACCCGCCGAAACGCTACACCGTCGGCGCGCGCAAGCGCCTGCACGACAGCTTCCAGGGCGACGCCAGCGGCGACTACCACCTGGAAGTGCACGGTCC GAACGGTTTCCTCCGGGTCTTTCGCGGCAACCTGCGGCGCGACCTGGCGGAGCGCAAGGCGCCGCTGCCGGAAGTGCGGATCGACTACGAGCCGCTGTTC GGCAACCTGCGCGTGCAACTGATCAACCGTGGCCGCCATCCGGTCAAGCTGACGGTCAAGGACAACGTCTATCGCCAGGGCGAGCGGCGTACCGTCAACG TGCCGCCGGGACAGCGCCGGGAAGTCCGCTATTCGCTGCGCAGCAGCGGCAACTGGTACGACTTCAGCGTCAGCGCGCAGGGGGCGGACAGCTTCCTGCG GCGTTTCAGCGGTCGCATGGAAGATGGTCGCTCCGGCTTCAGCGACCCGGGCATGGGCCTGGGCACGCTGACCTTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCGGACGGCCGCGCCGGCTCCCTGCAATGGGGCGGCCGGCGCGGACGGCCTGCGCCCTAGTCGAGGGGAACCGGGTAGAGGGTATTGAGGATCCACTTG CCGTCCTTCAGGACGAAACCGTACGAAATCTCCTTGGCCATGTACGTATCCCAGCGCGTGCAGACGCCCTGGCCGTCGGCCTGCTTGCAGGAGTAGGCAT CGATCTTGCCCATGTGCAGCTTCTCCAGGGAAACCACCTGGAACTTGCTGTTGCCGCTGCAGGCCACCGGATTGTCGATGTATCCGTACTGGCGCCAGGC CGCGTCGTAGTTGCCTCTCGACTTGAACAGGGTCTTGTCTTTCTGCGACGAGCCGGACGGCGGCGTCATCCCGTAGATGTGCTGGGTCACGTGGCCGCCC ATCGAGGTATTGCGCGTGGCGTCGGCGCTTTGCTGCACGCTGGTGATGTCGCGGCAGGCGGCGGCGTTGGCCGAGGAGGCCAGCAGCAGAAGGGCGGAGA
|
|
| Amino Acid Sequence |
>phospholipase C
MISKSRRSFIRLAAGTVGATVATSMLPSSIQAALAIPAHRRHGNLKDVEHVVILMQENRSFDHYFGTLKGVRGFGDRMAIPLPDGQRVWHQKGSKGEILP YHFDTSTTSAQRVDGTPHTWPDAQQAWNEGRMDKWLPAKTERSLGYYKEQDIAFQFAMANAFTICDAYHCSFQGGTNPNRLFLWTGTNDPLGQHGGPVTT NDHDSNGPVEQGYTWTTYPERLQAAGITWRVYQDMADNFSDNPLIGFRQYRAAAPDSPLIVNGLSTWKLDALKRDVLANSLPQVSWIVAPAKYSEHPGPS SPIWGAEYTSWVLDALTANPEVWSKTALLVMFDENDGFFDHVAPPAAPSLNKDGTLRGKTTADATLEWHTKGDIRYRNQPYGLGPRVPMYVISPWSKGGW VNSQVFDHTSVIRFLEQRFGVMEPNISPWRRAVCGDLTSAFNFANPNNEPFPELPDTSQADAIVASQIKLPKPKPPAVAAMPKQEMGIRPARALPYELGV HARYRSGGDALSLTFANTGKAGAVFQVFDLLDSENPPKRYTVGARKRLHDSFQGDASGDYHLEVHGPNGFLRVFRGNLRRDLAERKAPLPEVRIDYEPLF GNLRVQLINRGRHPVKLTVKDNVYRQGERRTVNVPPGQRREVRYSLRSSGNWYDFSVSAQGADSFLRRFSGRMEDGRSGFSDPGMGLGTLTF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|