Pseudomonas aeruginosa BWH032, AJ72_04001
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH032 adTys-supercont1.13, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCTCCGGATAGCGCGCATGGAACTCGGGCAACGCCGGGATCAGCAGCAGCCGCGCCAGCGGGCTCGGTACGTCGATCCGGAGACGCCCGCGGGGCGCCAG GGCGGCGCTGGAGAGGCTGGTCTCGGCATCGTCCAGTTCCGCCAGCAGACGTACCACCCGCTCGTAGTAGGCGGCGCCGTCGGCGGTCAGGTTGAGCTTG CGCGTGGTGCGGTTGAGCAGGCGTACCCGCAGCCGCGCTTCCAGTTGCTGGACCAACTGGGTGACGCTGGTGCGGCTCATGTGCAGCGTCTCCGCCGCCT TGGTGAAGCTGCCGGTATCCACCACACGGGCAAAGGCCTGCATCGCATCGAAACGGTCCATCGGGACTCCGGGTCGTCGGGGATTGTTTGGATTCTACAA ACAGTCATGGCCAGGGTTGCGCGTTTATCCACGGCGCGCACGACCTTACCGTTCTTCCATCGACGATGACGGGGCCGGAGCCCCAGGATGGAGGTATCGC
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| DNA Sequence for Gene |
>AJ72_04001
ATGACTGTACGCGACGTGGTTTTCCCCGCCGGCCGCCAGGCCCTCTACGAGCGCAACCGCTATTCCCCGGCGGTCCGCAGCGACGGCCTGCTGTTCGTCT CCGGCCAGGTCGGCAGCCGCGACGACGGCTCTCCCGAACCCGAGCTGGAGACCCAGGTCCGCCGCGCCTTCGACAATCTGAATGCGGTGCTCGCCGCGGC CGGTTGCGGGTTCGACGATGTGCTCGACGTCACCGTGTTCATGGTCGACGCCGAGGCCAACTTCGAGCGCATCTGGAAGATCGTCCCGGAATACTGGGGC GAGGCGCCGTACCCCACGCTGACGGCGGTGGGGGTGAACTGGCTGTATGGCTTCAGCTTCGAGATCAAGGTGGTGGCGAGGTTGCCGGAGGGGCGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGCCGATGCGCAGTGCCGGGGCCAGCTCGGCTAGCGCCGGGGCTCTGAGGGACGCCGCAGGCTTACCCAGGCCGGCGCGTGGTCGCTGGCGTGCTCCTC GCCGCGCACCCAGCGATCCACCCCGGCGTCTTCCAGGTGGTCCGCCAGGCTGGCGCTGAGCAGCAGGTGGTCGATGCGCAGCCCGGCGTCGCGTTGCCAG TGCTGGCGGAAGTAGTCCCAGAAGGTATAGAGGCGCCGGTCGGGGAAACGCTGGCGTAGCGCGTCCACCCAGCCCTGCCGCAGGAGGCGCTCGAAGCACT CGCGGGACTCCGGCTGGAGCAGGGCGTCCTTTTTCCAGGAGCGGGTGTCGTAGATATCGAAGTCGCTGGGCACCACGTTGAAGTCGCCGGCCAGCACCAC CGGATGGCCGCTCTCCATCAGCTCGGCGGCGTGTCGGATGAGGTGCTCGAACCAGGCCAGCTTGTAGTCGAACTTCGGTCCCGGCTGGGGATTGCCATTG
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| Amino Acid Sequence |
>endoribonuclease L-PSP
MTVRDVVFPAGRQALYERNRYSPAVRSDGLLFVSGQVGSRDDGSPEPELETQVRRAFDNLNAVLAAAGCGFDDVLDVTVFMVDAEANFERIWKIVPEYWG EAPYPTLTAVGVNWLYGFSFEIKVVARLPEGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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