Strain | Pseudomonas aeruginosa BWH032 adTys-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTCGGCCTCGCCGTCGAGGACGTGGTCGCCATGGGCCGCACGCCGCACAAGGGCCTGTTCGACGGCCACGGCGCGGACGACCGCCAGCGGGTCCGCCAGG CGCTGCTCCAGGTCGGTCTCGAAGGGCGTGCCGCGAGCCCCTTCGCCAGCCTCTCCGGTGGCGAGAAGCAGCGCGCCCTGCTGGCTCGCGCGCTGGTCCA GGAACCGCGCCTGCTGATCCTCGACGAACCGACCAACCACCTCGACCCGCGCTACCAGCTGGAGCTTCTGCGCCTGCTGCGCGGCCTCGGCCTGAGCACC CTGGCGAGCTTCCACGACCTCAACCTGGCGGCGGCCTTCTGCGACCGCCTCTACGTGCTCGACGGCGGGCGCATCGTCGCCCAGGGCACGCCGACCGAGG TGCTCGACGCCGACCTGCTGTGGCGGGTGTTCGGCGTCCGCGCCCTGGTCGACCGCCACCCCCTCGCCGACCACCCGCGCCTGACCTGGATTACCCAAGC
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DNA Sequence for Gene |
>AJ72_00873
ATGAAGCACCCGCTCCTGCACCACCTGCTGCTCGGCGCCCTGCTCGCCTGCGCCGATGCCGCGCTGGCCGAGCGCTACCCGCTCAGCGTGCGCAGTTGCG AGCGCGAAGTGACGTTCGAGCGCGCGCCGTCGCGCGCGGTCAGCCACGACATCAACCTCACCGAGATGATGGTCGCCCTCGGTCTGCAGACGCGCATGGT CGGCTATACCGGCATCAGCGGCTGGTGGAAGAATGCCGATCCCGGATTGATCGCCGCGCTCAAGCCGCTGCCCGAGCTGGTGGCGCGCTACCCCACGGCG GAAACCCTGCTCGATGTCGACGCCGACTTCTTCTTCGCCGGTTGGGGCTACGGCATGCGCGTCGGCGGCGACCTCACTCCGGCCAGCCTGGAGCCGCTGG GGGTGAAGGTCTACGAGCTGAGCGAATCCTGCGCGCAGATCGGCGAGCCGCGCCGCGCCAGCCTCGACGAGCTGTACCGCGACCTGCGCAACCTGGGACG GATCTTCGACGTCGAACCGCGCGCCGAGCGCCTGGTCGCCAGCCTCCAGGCACGCATCGAGCGCGCCCGCGCCGGCATCCCGGCGAACGCCGAGGCGCCG CGGGTGTTCCTCTACGACAGCGGCGAGGACCGCCCCTTCACCTCTGGCCGCCTGGGCATGCCGCAGGCGCTGATCGAGGCCGCCGGCGGTCGCAGCGTGA CCGACGACGTGGCGGCCAGCTGGACCCAGGTCAACTGGGAAAGCGTGGTCGCCCGCGATCCGCAGGTCATCGTCATCGTCGACTACGGCGAGACCAGCGC CGCGCAGAAGCAGCGCTTCCTCGAAGAGAACCCGGCGCTGCGCAGCCTGACCGCGATCCGCGAGCGACGCTTCATCGTCCTGCCCTATAACCAGGCCACG CCAGGCATCGGCAACGCCGCGGCGATAGAAACCCTGGTCGCCGGCCTCCACCCTCGGGCGCCACGTCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCTGTTCCGCAGCCCTCGCGCCTATTGCCTGTTGCTGGGCGGCCTGGTCATGTTGCTCGGCCTGTCCTGCGTGGTCGCCCTCGGCTTCGGTCCGGCGCG ACTGGACAGCGGCCTGGTCGGCCGCATCGTCCTCCAGCGCCTGTTCGGCGTGGCGGCGGAGGCCGGTGCCTGGAGCGCCGGCCAGGAGCACATCGTCTGG CTGATCCGCGCCCCACGGGTACTGCTCGGCGCCTGCGTCGGCGCCGGCCTGGCGCTGGTGGGAGCGGCCCTGCAGGCGGTCACGCGCAATCCGCTGGCCG ATCCGCACCTGCTCGGCGCCACCTCCGGCGCGACCCTCGGCGCGGTGTTGGTGGTGCTCTACATCGGCGAGGTGATCGGCCTGCTGACCCTGCCGCTGGC GGCCTTCCTCGGCGCCCTCGGCAGCATGCTGCTGGTGCTCGGCGTGGCCAGTCGCGGCGGCCGCCTGGGCAGCGACCGGCTGTTGCTGGCGGGGGTCGCG
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Amino Acid Sequence |
>iron ABC transporter substrate-binding protein
MKHPLLHHLLLGALLACADAALAERYPLSVRSCEREVTFERAPSRAVSHDINLTEMMVALGLQTRMVGYTGISGWWKNADPGLIAALKPLPELVARYPTA ETLLDVDADFFFAGWGYGMRVGGDLTPASLEPLGVKVYELSESCAQIGEPRRASLDELYRDLRNLGRIFDVEPRAERLVASLQARIERARAGIPANAEAP RVFLYDSGEDRPFTSGRLGMPQALIEAAGGRSVTDDVAASWTQVNWESVVARDPQVIVIVDYGETSAAQKQRFLEENPALRSLTAIRERRFIVLPYNQAT PGIGNAAAIETLVAGLHPRAPRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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