Pseudomonas aeruginosa BWH033, AJ73_03988
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH033 adTzk-supercont1.14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAGATCGTCGGTGAGGCGCTGGTTCAGGCGCAGCTCTTCGTTGCAATAGAAGCGGCGCTTGTCCAGGCTGGTGAAATCGAGAAAGCCGAAATCCATCGGC TTCTTGATCTTGTAGGCGTAGGGACCGGTCAACAGGACCCAGGAGATGTGCGTCTCGATGACCTCGAAGCGCTCCACCGGGTGGGGGTAGAGGGCCGGGT TCTGCAGGGCGGCGATCAGGGTCTGGCTCACGGGATATCCTTGCCTCTGAAATATGCGAAAACCCGCATTATGGCGGGAAGGGGTGACAGTGCAAACCTC GCTGGCGGATAGCAACCATTTGCCGGATCGCCGGTCGAATGCGCCGCGCTGCCGCCGCGTCTATCCACCGGGGCCGCGCAGACCGTGGATGCCGCCGATG CGGTGTCTGTCCGCTGTGGATAAAGTACGTATAATGCGCCGCCATGACGCGTCCCCGATCCCCCCGTTCCCGTAACAGCAAAGCACGCCCGGCACCCGGC
|
|
| DNA Sequence for Gene |
>AJ73_03988
CTGAACAAATGGCTCAGCTGGGCTCTCAAGCTCGGCCTCGTCGGCCTGGTGCTCCTCGCCGGCTTCGCCATCTATCTCGATGCCGTGGTGCAGGAGAAAT TCTCCGGCCGGCGCTGGACCATCCCGGCGAAGGTCTATGCCCGCCCGCTGGAGCTGTTCAACGGCCTGAAGCTGAGCAGGGAAGACTTCCTGCGCGAACT CGACGCCCTCGGCTACCGTCGCGAGCCCAACGTGAGCGGCCCTGGAACCGTATCGGTGGCGGCCAGCGCGGTCGAACTCAATACCCGTGGCTTCCAGTTC TACGAAGGCGCGGAACCGGCCCAGCGCGTGCGCGTGCGCTTCAACGGCAACTACGTCAGCGGGCTGAGCCAGGCCAACGGCAAGGAACTGGCGGTGGCGC GCCTTGAGCCGCTGCTGATCGGCGGCTTGTATCCGGCGCACCATGAGGATCGCATCCTGGTCAAGCTCGACCAGGTGCCGACCTACCTGATCGACACCCT GGTCGCGGTCGAGGATCGCGACTTCTGGAACCACCATGGTGTGTCGCTGAAATCCGTGGCGCGGGCGGTGTGGGTCAACACCACGGCCGGCCAGTTGCGC CAGGGCGGCAGCACCCTGACCCAGCAGTTGGTGAAGAACTTCTTCCTGAGCAATGAGCGCAGCCTGAGCCGCAAGATCAACGAAGCGATGATGGCGGTGC TGCTGGAACTGCACTACGACAAGCGCGACATCCTCGAGTCCTATCTCAACGAGGTGTTCCTCGGCCAGGATGGGCAACGAGCGATCCATGGCTTCGGCCT GGCCAGCCAGTATTTCTTCAGTCAGCCGTTGGCCGAGCTCAAGCTCGACCAGGTGGCGCTGCTGGTCGGCATGGTCAAGGGGCCGTCCTACTTCAACCCG CGGCGTTACCCGGATCGTGCGCTGGCGCGGCGCAACCTGGTGCTCGACGTGCTCGCCGAGCAGGGCGTGGCGACCCAGCAGGAAGTCGACGCCGCCAAGC TGCGCCCGCTCGGCGTGACCCGGCAGGGCAGCATGGCCGACAGCTCCTATCCGGCCTTCCTCGACCTGGTCAAGCGCCAGTTGCGCCAGGACTACCGCGA CGAGGACCTGACCGAGGAAGGGCTGCGCATCTTCACCAGCTTCGATCCGATCCTGCAGGAGAAGGCCGAGACCTCCGTCAACGAAACGCTCAAGCGTCTC AGTGGGCGCAAGGGGGTCGACCAGGTCGAGGCGGCGATGGTCGTGACCAATCCGGAAACCGGTGAGATCCAGGCCCTGATCGGCAGTCGCGACCCGCGCT TCGCCGGCTTCAACCGGGCCCTGGACGCGGTGCGGCCGATCGGTTCGCTGATCAAGCCGGCGGTCTACCTGACCGCTCTCGAGCGGCCGAGCAAGTACAC CCTGACCACCTGGGTACAGGACGAGCCCTTCGCGGTGAAAGGCCAGGACGGCCAGGTCTGGCGACCGCAGAACTACGACCGGCGCTCGCATGGCACGATC TTCCTGTACCAGGGCCTGGCAAACTCCTACAACCTGTCCACCGCCAAGCTCGGCCTCGACGTCGGTGTGCCCAACGTGCTGCAGACCGTCGCCCGGCTGG GTATCAACCGTGACTGGCCGGCCTATCCTTCGATGCTGCTGGGCGCCGGTTCGCTCAGTCCGATGGAGGTCGCCACCATGTACCAGACCATCGCCAGCGG CGGCTTCAACACGCCGTTGCGGGGGATCCGCAGCGTCCTCACTGCCGACGGCCAGCCGCTCAAGCGCTATCCGTTCCAGGTCGAACAGCGCTTCGACTCG GGCGCCGTCTACCTGGTGCAGAACGCCATGCAGCGGGTCATGCGCGAAGGCACCGGGCGTTCGGTGTACAGTCAATTGCCGTCGTCGCTGACCCTCGCCG GCAAGACCGGCACCAGCAACGACTCGCGCGATAGCTGGTTCTCCGGTTTCGGCGGCGACCTCCAGGCTGTGGTCTGGCTCGGTCGCGACGACAACGGCAA GACGCCGCTTACCGGCGCCACCGGTGCCTTGCAGGTGTGGGCCAGCTTCATGCGCAAGGCGCATCCGCAATCGCTGGAAATGCCGATGCCGGAGAACGTG GTGATGGCCTGGGTCGACGCGCAGACCGGGCAGGGCTCGGCGGCGGATTGCCCGAATGCCGTACAGATGCCCTATATTCGTGGCAGCGAGCCCGCCCAGG GCCCAGGCTGCGGGAGCCAGAACCCCGCCGGCGAGGTGATGGACTGGGTACGTGGCTGGCTGAATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCCGAGAGGACCTGACGTGAAGAAGATTTTCGTATTCGCCGCGCTTGCCGGCAGTGCCCTGCTCGCGGGCTGTGCCAGCCCGCAGCATGGGGCGATCCCG GTGGTGGATTCCGGCACTCCGGTTTCCAACCAGGAAAGCGGCGGTTTCCGCATCACCCGTACCCAGGTACCGCGTACCCAGCAAGGCGCCGCCACCCAGG GCATTCCCCAGGGCGGCGACTCCGGCGTGGTGGTGATGGTGCCGCAGGGCGCCAATTCCGCACCGATCCAGACTTTCCCGGCGCAGTCCGGCGCCGCGCC GATCAGCAGCGCTCCGCTCGGCACCGGCACCCAGTACCAGGCTCCGCCCAGCAGCGCCTCCACGCCACCGCTGGGCGACAGCTACAACATGCCGCCCAGC GGCGCCAGTCGTTCCGCGCCCACCGGCATTCCGGCCTCCGGCTCGGCCGGCAGCCTGGCAGCCGACGAACAGTTGGACGGGCCGGTCCTGGCGATGCTCA
|
|
| Amino Acid Sequence |
>penicillin-binding protein
MNKWLSWALKLGLVGLVLLAGFAIYLDAVVQEKFSGRRWTIPAKVYARPLELFNGLKLSREDFLRELDALGYRREPNVSGPGTVSVAASAVELNTRGFQF YEGAEPAQRVRVRFNGNYVSGLSQANGKELAVARLEPLLIGGLYPAHHEDRILVKLDQVPTYLIDTLVAVEDRDFWNHHGVSLKSVARAVWVNTTAGQLR QGGSTLTQQLVKNFFLSNERSLSRKINEAMMAVLLELHYDKRDILESYLNEVFLGQDGQRAIHGFGLASQYFFSQPLAELKLDQVALLVGMVKGPSYFNP RRYPDRALARRNLVLDVLAEQGVATQQEVDAAKLRPLGVTRQGSMADSSYPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQEKAETSVNETLKRL SGRKGVDQVEAAMVVTNPETGEIQALIGSRDPRFAGFNRALDAVRPIGSLIKPAVYLTALERPSKYTLTTWVQDEPFAVKGQDGQVWRPQNYDRRSHGTI FLYQGLANSYNLSTAKLGLDVGVPNVLQTVARLGINRDWPAYPSMLLGAGSLSPMEVATMYQTIASGGFNTPLRGIRSVLTADGQPLKRYPFQVEQRFDS GAVYLVQNAMQRVMREGTGRSVYSQLPSSLTLAGKTGTSNDSRDSWFSGFGGDLQAVVWLGRDDNGKTPLTGATGALQVWASFMRKAHPQSLEMPMPENV VMAWVDAQTGQGSAADCPNAVQMPYIRGSEPAQGPGCGSQNPAGEVMDWVRGWLN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|