Pseudomonas aeruginosa BWH033, AJ73_02944
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH033 adTzk-supercont1.8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGGAGCCGAAGACCGGCTTCATGCTCATCGACACCCTGCTCTCCGACGAGGAAGGCGCGTTCCTCGACGCCGTGCGCCACCTGATCCTGCCGGCCATCG TGCTGGGCACCATCCCGCTGGCGGTGATCGCCCGCATGACCCGCTCGGCGATGCTCGAGGTCCTGCGCGAGGACTACGTGCGCACCGCCCGCGCCAAGGG CTTGTCGCCGGCCCGGGTGGTCTTCGTGCACGCCCTGCGCAACGCGCTGATCCCGGTGCTGACGGTGTTAGGCCTGCAGGTCGGCACCCTGCTCGCCGGC GCGGTGCTGACCGAGACCATCTTCTCCTGGCCGGGCATCGGCAAGTGGCTGATCGACGCCATCAGCGCTCGCGACTACCCGGTGGTGCAGAACGGCATCC TGCTGGTCGCCACCCTGGTCATCCTGGTCAATTTCGTCGTGGACATCCTCTACGGCCTGGCCAACCCACGCATTCGCCACCAACGCTGAGGAGCGAGCCG
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| DNA Sequence for Gene |
>AJ73_02944
ATGAACGCCATGCACAACGCTCCCGCCAGCGACCCGAGCCTGGTCTACCCGTCCCCGCTGAAGGAATTCTGGCAAGCCTTTACCCGGAACAAAGGTGCCG TCGGCGGCCTGCTGTTCATGCTGCTGATCGTGTTCTGCGCGCTGTTCGCCCCCTGGGTCGCGCCCTACGATCCGAGCGAACAATTCCGCGACTTCCTGCT GACCCCGCCGTCCTGGCTGGAGGGCGGCCAGGCGCGTTTCCTGCTCGGCACCGACGAACTGGGCCGCGACCTGCTCTCGCGGCTGATCCACGGCGCCCGC CTGTCGCTGCTGATCGGCCTGTCCTCGGTGGTGATCTCGCTGGTCCCCGGCATCCTCCTCGGCCTGCTCGCCGGCTTCTCGCCGAACCGTGCCGGGCCGC TGATCATGCGCCTGATGGACATCATGCTGGCGCTGCCGTCGCTGCTGCTGGCGGTGGCCATCGTGGCGATCCTCGGCCCAGGCCTGATCAACACCGTGAT CGCCATCGCCATCGTCTCGCTGCCGGCCTACGTGCGCCTGACCCGCGCCGCGGTGATGACCGAGCTAAACCGCGACTACGTCACCGCCTCGCGCCTGGCC GGCGCCGGCACCCTGCGCCTGATGTTCGTCTGCGTACTGCCGAACTGCATGGCGCCGCTGATCGTCCAGGCCACCCTGAGCTTCTCTTCGGCGATCCTCG ACGCCGCCGCCCTCGGCTTCCTCGGCCTCGGCGTGCAACCGCCGACCCCCGAGTGGGGCACCATGCTCGCCTCCGCCCGCGACTACATCGAGCGCGCCTG GTGGGTGGTCAGCCTGCCCGGCCTGACCATCCTGCTCAGCGTACTGGCGATCAACCTGATGGGCGACGGCCTGCGCGACGCCCTCGATCCGAAACTGAAG AACGCGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGCACAACCATGAACAGCGCATCCGTATCCGCGCCACAGGAGACCGCCGCATGAGCCTCCTCGATATCAAGAACCTCAGCGTACGCTTCGGCGACACC ACCGCCGTGCCCGTGGTCGACGGCCTCGACCTGAGCGTCGACAAGGGCGAGGTGCTGGCCATCGTCGGCGAGTCCGGCTCCGGCAAGTCGGTGACCATGA TGGCCCTGATGGGCCTGATCGACGCGCCCGGCTGGGTGTCCGCCGATCACCTGCGCTTCGACGGCCACGACATGCTCACCCTCAAGGGCCGCCAGCGCCG GCGTATCGTCGGCAAGGACATGGCGATGGTCTTCCAGGACCCGATGACCGCGCTCAACCCCAGCTACACCGTCGGCTACCAGATCGAGGAGGTTCTTCGC CTGCATCTCGGCCTGCGCGGCAAGGCCCTGCGCCAGCGCGCCCTGGAACTGCTCGAACGGGTCGAGATCCCGGCCGCCGCCAGCCGCCTCGACGCCTACC
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| Amino Acid Sequence |
>peptide ABC transporter
MNAMHNAPASDPSLVYPSPLKEFWQAFTRNKGAVGGLLFMLLIVFCALFAPWVAPYDPSEQFRDFLLTPPSWLEGGQARFLLGTDELGRDLLSRLIHGAR LSLLIGLSSVVISLVPGILLGLLAGFSPNRAGPLIMRLMDIMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPAYVRLTRAAVMTELNRDYVTASRLA GAGTLRLMFVCVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLK NAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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