Pseudomonas aeruginosa BWH031, AJ71_04644
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH031 adTxV-supercont1.22, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGGCGAGCAACTCGCGGGCGCTCTGCCAGACCAGCTCGGGAGTTGGCAGCACCTGGGCCGACATCCAGTGGCGATGGCTGGCGACCCACCACAGCAGC GCCAGCCCGAGCGGCAGCAACCAGGGCAGCAGGCCGTCCCCCAGGCGCCGGGCGAAAGCCGCGGAGGGCGGCGGCGCCAGGCGCGGCAGGGGCCGGCTCC AGGCGGGCGAAAGGGTTTTATCGATATTCTTCATGGGAATATAAATCGCCGAATCAATGCATTTTTTCGCTAAGAAGGGCCATTTAAAGAAAGGCACCAG GCAGCGGCAAATGCATTTGGAGAATATTTTCCATGCTCTGGCTGCATATGACGCGGAGAGGCCCGTGCGGCCTGTCATACTGCTTGTGGTTATAAAAAAA TGAATTTTTATTATTTATTTTCGAGGCGCCGCTGTGCATAGCTAGCCGCACACCCGCTCCCGGCGGGAATCCCTCTCTTCCCGTTCCAAGGAGCCGCCCC
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| DNA Sequence for Gene |
>AJ71_04644
ATGAAAGCGCTTACGTCTTCCCTGCTCGGTCTGTTCGCCGCGCCTGTGCTCGCCGGCCTGCTCGGTGCCTACGTGCCGCTGGCGAGCGCCGCTCCGCCGA AGGAAATCCGCATCGCGGTGCCGGACGTCAGCGCCGGCAGTTCGCACTCGGGCGGCGGCGTGGTCGACGTGCTCTACACCCGCCAGTTGCTGGAGAAGGA GTTCGCCAACGACGGCATCGCGGTGAAATGGAGCTTCTTCAAGGGCGCCGGCCCGGTGGTCAACGAAGCGTTCGCCAACGGCCAGGTGGACTTCGCCTAC CTCGGCGACCTGGCGGCGATCATCGGCAAGTCCGGAGGCCTGGACAGCCGCCTGCTGGCCGCTACCGCGCGAGGGGTCAACCACTATCTCGGCGTGCAGC CGGGCTCCGGGATCAAGACCCTGGAGGATCTCAAGGGCAAGCGCGTTGGCATCTTCCGTGGCACCGCCAGCCAGTTGTCGTTCGACAATGCCCTGGCCAG CGTCGGTCTCAGCGAGAAGGACCTGAAGGTGATCAACCTCGATTTCAGTGCCGCCCTGTCCGCCCTCGCAGCCAGGCAGATCGATGCCACCTGGGGCCTG GCCGGACTGTTCGCCCTGCGCGACCGCGGGCTCGCGGAAATTCCGCTGAGCACCCGCGACCTGAACGGCGCCGGCACCCTGCAGGCGCTGCTGGTCGGCT CCGGAGCCTTCGTCGATGCCCATCCGGACATCACCGAGCGGCTGCTCAAGGTGCAGTTGCAGGCCCAGGACTGGCTGGCCCGCGAGGAGAACCGCGACGC TTACATCGAACTGGTGTCGAAGCAGGCCAGCTACCCGGTGGTGATCCTGCAGAGCGAGTACCGTGGCCGCAAGCTGGGCGACGCCCTGTCGCCGCGCCTG GACGCCGATTTCCTTGGCCGGCTGGATGCTTCGATCCAGGCGGCCAAGCGTTTCGGCCTGATCCGTCGCGAATTCAGCGCCGAGCAGTGGGCCGCGCCGG AACTGCTGGAGGCGGCCGGCAAGCTGGCGAAGGCCAAGGCCGTGGCGCAAGCGGCGGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCCGCGCCGCGGCCCGGGGCGTCACCAGATCGAGCGGGAGTAATCGACGACCAGCCGGGTTTCGTCGATGTCGCCGTCGAGATAGCTCGCGTTGCCCCG GTGCCAGGCCTGCGAGGCGCGCAGGGCGAGGCCGGCGAGGGGGCCCGCCTTGACCCGATAGGCGAAGCCGAGGTCGCTTTCCCGGTGCCGCCCGTCACGC CCGTAGAGTCCGGCGTAGATGCTCTCGGCGGCACTGCTGGCGCTGGCCCCGGCACGGCCGCGGGCATGCAGCGCATGCAGGCTGAGCCCAGGCAGGCCGA GCGCGCCGAGGTCCAGGTCATAGCGTAATTGCCAGGAACGCTCGCCCGGTCCGTTGAAGTCGGAGTAGCCCACCGAGTTGGCCAGTACCATGGACGCGCT GGAGCGCCCGTCGCCGAAGGCCATGTAGTCGAACGGCTGCTCGCCATGGACACGCTGGTAGGCCAGGGTGATGCGCTGCGGCCCCTGTTCGTAGCCCAGG
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| Amino Acid Sequence |
>nitrate ABC transporter substrate-binding protein
MKALTSSLLGLFAAPVLAGLLGAYVPLASAAPPKEIRIAVPDVSAGSSHSGGGVVDVLYTRQLLEKEFANDGIAVKWSFFKGAGPVVNEAFANGQVDFAY LGDLAAIIGKSGGLDSRLLAATARGVNHYLGVQPGSGIKTLEDLKGKRVGIFRGTASQLSFDNALASVGLSEKDLKVINLDFSAALSALAARQIDATWGL AGLFALRDRGLAEIPLSTRDLNGAGTLQALLVGSGAFVDAHPDITERLLKVQLQAQDWLAREENRDAYIELVSKQASYPVVILQSEYRGRKLGDALSPRL DADFLGRLDASIQAAKRFGLIRREFSAEQWAAPELLEAAGKLAKAKAVAQAAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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