Pseudomonas aeruginosa BWH031, AJ71_03825

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa BWH031 adTxV-supercont1.15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTATGCACCAATCGCTATCTGGCCGAGCGCCTGGGTGCCGGCACCGCGCTGGGCTTCGAACGGCCCGGGCCGGTCGCCGCCGCACGCCTGCGCAACGCGC CCAGCGCGCAGAGCCAGCCGCGCCTGGACGGCCAGTCGCGCTGGAGACTGGTCTCGCAGCTGACCCTCAACCACCTCTCGCTGGTGGAAGGTCCGCGCGC CCTCGAAGCCCTGCGGGAGATCCTCGCCCTGCACAACCTGCGCGACGATGCCAGCGCCCTCCGGCAGATAGAAGGCCTGCGGCAACTCGACTGCCAGCGG GTGGTGGCGCACGTCGGCGAGGATGCCTGGCGCGGCTGGCGCAATGGCCTGGAAATCCGCCTGCGACTCGATCCGCAACACTTCGTCGGCGCCAGCGGCG TGCTGTTCTCCGCCGTGCTGGCGCAGTTCTTCTCGCTGTATGCCACCGCCAACCGCTTCGTGCGCACGGTCCTGGTGGAAGCCGACAAGGAGGTGAAGAC
DNA Sequence for Gene
>AJ71_03825
ATGGCAACCCCAGGCCGGCTCGCCGCTCTCCCTCTGAGTCAGCGGCTGCGCCGCACGCCGCAGCGCTTCGAACTGTTGCAGGCGCTGCTGCTGCTCGAAC GCGAGCGTCCCCAGGCGTTGCCGCTGGGCACCGGCAACGCGCCGCGGGCGGAGGCCCTGCGCCTGCGCGGGCCGCTGTTGCCGCTGTTCGCCTCGAGCGA GGTGGAAAGCCTGCTCGACGACCCGCAGCAACCGGTGCTGTCCACCCCGGTGTTCGGCCTCGGCGGACCCGACGGCCCGTTGCCCTATGCCTACCAGGAA TGGCTGCAACAACGCGCCCGGCAGAAGGACCATGCCCCCGCCGAGTTCCTCGACCTGTTCCAGCACCGCCTGCTCAGCCTGCTCTACCGGGTGCTGCGCA AGCATCGCGTGGCGCTCGGTTTCGCGGTGCCGGCGGCGACCCCGGTGCAGGCGCAGCTACGCGCCCTCAGCGGCCTGTTGCCGAAAGCCCTGCAAGAGCG CCTGGCGCTGCCGGACAGCGCGGTACTGGCACGCACCGCGCTGTTCGCCGGCGGGCGTCGCTCCCTGGCCGGCTTCGCCGGCCTGGTGCGCCAGCATTTC GGCGTGGAGGCACGGCTGGACGCCTACCAGGGCGCCTGGAAGGAAATCCCCGCGGCCAGCCGCAGCCGGCTGCAACGCGGCGGACGCAACCTGCGTCTGG GTCGCGACGCCATAGCCGGCACGCGCACCTGGGACGAGCACGCCGGCATCGCCCTCAGTCTCGGTCCGCTGGATGCCCGCGAAGCCGCCCGCTTCTTCCC CGACGGCGACGCCCATGGCCAGTTGGCCAGCCTCGCCGCGCTGTACTTCGGCCCCGACCTGGATTGTCGCCTGAGCCTGCTGGTGAGCGGCGGCGCGCCG CTGCGCCTGGAGCGCGGTGCACCGCCCAGGCTGAGCTGGAACACCGGCCTGCGGCGCGTCGAAGACGGCCAGCGGCAGCGCATCGATCTCGACCTGCGGC AGCCGGAGGTAGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATGGAACTCGCCGCCCTGATCGGCCGCCTCAACCCGGACTGTCGCCGCGCCCTGGAGCGCGCCGCGCAACGCTGCCTGCAACGCACCCATCATTACGTA GAGATCGAGCACCTGCTGCTGGAACTGCTGGACATCGACGGCGGCGACTTCGCCTGCCTGCTGCCGCGCTTCGGCCTGGAGCGCGACGCCCTGGTCGCCG AGATCAACCTGTCGCTGGAGCTGTTCAAGGCCGGCAATACCCGCACTCCGGCGCTGTCCGCGCACACCATCGGCCTGCTCGAAGACGCCGTGGTCCACGC CAGCGTGCTCGGCCAGGCGCAGATTCGTTCCGGCCTGCTGCTGCTCGCCCTGCTCGACCGCGAGGAGCGCCGCGCCCTGCTGCTGAACAGCGCGTCGTCG CTGCTGCGGATTCCCCACGAGGCCTTGCAGGCCAACCTGCTGGAGTGGATCCAGGCCTCCCGCGAACAGCCGGCCGCGCCGAACCGCCCGGCGGCAGGCG
Amino Acid Sequence
>type VI secretion protein
MATPGRLAALPLSQRLRRTPQRFELLQALLLLERERPQALPLGTGNAPRAEALRLRGPLLPLFASSEVESLLDDPQQPVLSTPVFGLGGPDGPLPYAYQE WLQQRARQKDHAPAEFLDLFQHRLLSLLYRVLRKHRVALGFAVPAATPVQAQLRALSGLLPKALQERLALPDSAVLARTALFAGGRRSLAGFAGLVRQHF GVEARLDAYQGAWKEIPAASRSRLQRGGRNLRLGRDAIAGTRTWDEHAGIALSLGPLDAREAARFFPDGDAHGQLASLAALYFGPDLDCRLSLLVSGGAP LRLERGAPPRLSWNTGLRRVEDGQRQRIDLDLRQPEVA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site