Pseudomonas aeruginosa BWH031, AJ71_03538
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH031 adTxV-supercont1.13, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGCGACCAACCGCGACCTGGGCGCGATGGTCGCCCAGGGCCAGTTCCGCGAGGACCTGCTCTACCGCCTCAACGTGATCGTGCTCAACCTGCCTCCCC TGCGCGAACGCGCCGAGGATATCCTCGGCCTGGCCGAACGTTTCCTCGCCCGCTTCGTCAAGGACTACGGCCGCCCCGCCCGCGGCTTCAGCGAAGCCGC CCGCGAGGCCATGCGGCAATACCCCTGGCCGGGCAACGTACGCGAGCTACGCAACGTGATCGAACGCGCCAGCATCATCTGCAACCAGGAACTGGTGGAT GTCGACCACCTCGGTTTCAGCGCTGCGCAATCTGCCAGCAGCGCGCCGCGGATCGGCGAATCGCTGAGCCTGGAAGACCTGGAGAAAGCCCATATCACGG CGGTGATGGCCTCCAGCGCGACCCTCGACCAGGCCGCCAAGACCCTCGGTATCGATGCCTCGACCCTGTACCGGAAGCGCAAGCAGTACGGCCTATGAGC
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| DNA Sequence for Gene |
>AJ71_03538
ATGCCGCTGCCGATGAAGCTCCGGACCCGGTTGTTCCTCAGCATTTCCGCGCTGATCACCGTCTCGCTGTTCGGCCTGCTGCTCGGGCTGTTCAGCGTGA TGCAGCTCGGCCGCGCCCAGGAACAACGGATGTCGCACCACTACGCGACCATCGAGGTGAGCCAGCAACTGCGCCAGTTGCTCGGCGACCAGCTGGTCAT ACTGCTCCGCGAAACCCCCGACGGGCAGGCCCTGGAGCGCTCGCAAAACGACTTCCGACGAGTCCTGGAACAGGGCCGGGCGAATACCGTCGACAGCGCC GAGCAGGCCGCCCTGGATGGCGTCCGCGACGCCTACCTGCAACTGCAGGCGCACACCCCGGCCCTGCTCGAGGCGCCCATGGCCGACAACGACGGCTTCA GCGAAGCCTTCAATGGCCTGCGCCTGCGTTTGCAGGACCTGCAGCAACTGGCGCTGGCCGGCATCAGCGAAGCCGAGACCAGCGCCCGCCATCGTGCCTA CCTGGTCGCCGGCCTGCTTGGCCTGGTGGGCGTCGCCATCCTGCTGATCGGTTTCGTCACCGCCCACAGCATCGCCCGGCGCTTCGGCGCGCCGATCGAA ACCCTGGCGCGGGCGGCGGACAGGATCGGCGAAGGCGATTTCGACGTGACCCTGCCGATGACCAACGTCGCCGAGGTCGGCCAGTTGACCCGGCGTTTCG GCCTGATGGCCGAGGCCCTGCGGCAGTATCGCAAGACCAGCGTCGAAGAGGTGCTTTCCGGCGAGCGGCGCCTGCAGGCGGTACTCGACAGCATCGACGA CGGCCTGGTGATCTTCGACAACCAGGGACGCATCGAACACGCCAACCCGGTCGCGATCCGCCAGCTGTTCGTCTCCAACGACCCCCATGGCAAGCGGATC GACGAAATACTCAGCGATGTCGATGTCCAGGAGGCGGTGGAAAAGGCCCTGCTCGGCGAAGTCCAGGACGAGGCGATGCCCGACCTGGTGGTGGACGTCG CCGGCGAGTCGCGCCTGCTGGCCTGGTCGCTGTATCCGGTCACCCATCCCGGCGGGCATAGCGTCGGCGCGGTGCTGGTGGTCCGCGACGTGACCGAGCA GCGCGCCTTCGAACGGGTCCGCAGCGAATTCGTCCTGCGCGCCTCCCACGAACTGCGTACGCCGGTGACCGGCATGCAGATGGCCTTCAGCCTGCTCCGC GAACGCCTGGACTTCCCCGCGGAGTCACGGGAAGCGGACCTGATCCAGACGGTGGACGAAGAGATGTCGCGGCTGGTCCTGCTGATCAACGACCTGTTGA ACTTCTCGCGCTACCAGACCGGCATGCAGAAGCTCGAACTGGCTTCCTGCGACCTCGTCGACCTGCTCACCCAGGCGCAGCAGCGTTTCATTCCCAAGGG CGAGGCCCGCCGGGTCTCGCTGCAACTGGAGCTGGGCGATGAACTGCCGCGCCTGCAGCTCGATCGCCTGCAGATCGAGCGGGTGATCGACAACCTGCTG GAAAACGCCCTGCGCCATAGCAGCGAAGGCGGGCAGATCCACCTGCAGGCCCGGCGCCAGGGCGACCGGGTGCTGATCGCGGTGGAAGACAATGGCGAAG GCATTCCCTTCAGCCAGCAAGGACGGATCTTCGAGCCTTTCGTCCAGGTCGGACGCAAGAAGGGCGGCGCCGGCCTCGGCCTGGCGCTGTGCAAGGAAAT CATCCAGCTGCATGGCGGGCGCATCGCGGTGCGCTCGCAACCGGGCCAGGGCGCGCGCTTCTACATGCTGCTGCCGGTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGGGCCCGCTCCCGGCAGGCTTTTCCACAGGCCTCAGGAAGTCGGCACCGCCAGCAGCAGGGCGGCGGTTTCCAGGTCCGGCTCGCCATCGAAGCGGGC CGGACGGTATTTCATCTGGAAAGCGCCGATGACGTCGCGGGTGTCCTTCTCCAGCTCGCCGGTCTGCGGCACCAGGTAACCGTGCCGCGCCAACTGCTGC TGGAACCAGCGCACATCCGGCAGCTGGCCGTTCAGTTCGGCGAGCCGGCGCGCCAATTCGCCGGGCTTCGGCCAGGGCACCAGGCCGGCGTCGGCGAGGC GCTTCCAGGGGAACAGCGGACCCGGATCGACCTTGCGGCCCGGCGCGATATCGCTGTGTCCGATGATCCGGTCCGGGGTGATGCCGTGGCGCTTGGCGAT GTCCTTCAGCAGGGGGATCAGCGCCTGGATCTGTGCTTCGCTGAACGGATACCAGACCCGCCCCTGGGGTGTATCGCGATAGCCCTGGTTGACGATCTCG
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| Amino Acid Sequence |
>histidine kinase
MPLPMKLRTRLFLSISALITVSLFGLLLGLFSVMQLGRAQEQRMSHHYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVDSA EQAALDGVRDAYLQLQAHTPALLEAPMADNDGFSEAFNGLRLRLQDLQQLALAGISEAETSARHRAYLVAGLLGLVGVAILLIGFVTAHSIARRFGAPIE TLARAADRIGEGDFDVTLPMTNVAEVGQLTRRFGLMAEALRQYRKTSVEEVLSGERRLQAVLDSIDDGLVIFDNQGRIEHANPVAIRQLFVSNDPHGKRI DEILSDVDVQEAVEKALLGEVQDEAMPDLVVDVAGESRLLAWSLYPVTHPGGHSVGAVLVVRDVTEQRAFERVRSEFVLRASHELRTPVTGMQMAFSLLR ERLDFPAESREADLIQTVDEEMSRLVLLINDLLNFSRYQTGMQKLELASCDLVDLLTQAQQRFIPKGEARRVSLQLELGDELPRLQLDRLQIERVIDNLL ENALRHSSEGGQIHLQARRQGDRVLIAVEDNGEGIPFSQQGRIFEPFVQVGRKKGGAGLGLALCKEIIQLHGGRIAVRSQPGQGARFYMLLPV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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