Pseudomonas aeruginosa BWH031, AJ71_02336
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH031 adTxV-supercont1.7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGTCCGGCTTCCAGGGCGTAGGCCGGCGCTTCCAGGTCTACGGCGAGCTGCAGGTCGAGGGTGGCAGCGTGATGCTGGTGGACGATTACGGCCACCATC CGCGCGAAGTCGCCGCGGTGATCAAGGCGATCCGTGGCGGTTGGCCGGAGCGTCGCCTGGTGATGGTCTACCAGCCGCATCGCTATACCCGTACCCGCGA CCTGTACGAAGACTTCGTGCAGGTGCTGGGCGAAGCCAACGTGCTGCTGTTGATGGAGGTCTATCCGGCCGGCGAAGAGCCGATCCCGGGAGCCGACAGC CGCCAGCTGTGCCACAGCATCCGCCAGCGCGGCCAGCTTGACCCGATCTACTTCGAGCGCGACGCCGACCTGGCGCCGCTGGTCAAGCCGCTGCTGCGCG CTGGCGACATCCTGCTTTGCCAGGGCGCTGGCGATGTCGGCGGCCTGGCCCCGCAACTGATCAAGAACCCGCTGTTCGCCGGCAAGGGAGGGAAGGGCGC
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| DNA Sequence for Gene |
>AJ71_02336
ATGAACCTTTGCCTCGATAGCCTGCTGAACGGCACCCAGGATCCCAAGGCGTTCGGCCGTGTCGCCGTGCTGTTCGGCGGCAAGAGCGCCGAGCGCGAGG TGTCGCTGAAGTCCGGCGCGATGGTCCTGCAATCCCTGCTGGCCGCCGGGGTCGATGCCTTCGGCATCGATGTCGGCGAAGACCTGCTGCAACGCCTGGT CGAGGAGAAGATCGACCGTGCCTTCATCATTCTCCACGGTCGTGGCGGCGAGGATGGCAGCATGCAGGGCCTGCTCGAGTGCGCGGGCATTCCCTACACC GGCAGCGGCGTGCTGGCCTCGGCGCTGGCGATGGACAAGCTGCGGACCAAGCGGGTCTGGCTCAGCCTCGGCCTGCCGACCCCGGACTACGCGGTGCTGG CCAGCGAGGATGACTGCCGCGAAGCGGCGCAGCGACTGGGTTTCCCGCTGATCGTCAAGCCGGCTCACGAAGGCTCGAGCATCGGCATGGCCAAGGTCGG CGGGCTCGACGAATTGATCGCGGCGTGGCGCGAAGCGGCCCGCTACGACTCGCAGGTGCTGGTCGAGCAGTGGATCAGCGGCCCGGAATTCACCGTGGCG ACCTTGCGCGGGCAGGTGCTGCCGGCGATCCGCCTGGGCACGCCGCACACCTTCTACGACTATGACGCCAAGTACCTGGCCAGCGATACCCGCTACCAGG TGCCCTGCGGTCTCGACGAGGCCAAGGAACGCGAGCTGAAGGAACTCACCGCGCGCGCCTGCGACGCCCTGGGCATCCAGGGTTGGGGGCGGGCGGACGT GATGCAAGACGCCAAAGGGCGTTTCTGGCTGCTTGAAGTCAACACCGCACCGGGCATGACCGACCACAGCCTGGTGCCTATGGCCGCGCGGGCCGCCGGC CTGGATTTCCAGCAACTGGTGCTGGCGATCCTGGCCGATAGCCGCGAGGCGAGGGGATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCATGAATGGCGTACTGCTCCGTCATCAGCAACCCGGTGGACTCGGCCGCGCTCCGCGCAAGCCGATGCCGCGCGGCGCCAGCCGTCTGGTGGCCAAGG AACCGCTGAGCGTGCGCCTGCCGAAAGCCGACTTCAGTTTCCTCAAGTACCTGGCCTGGCCGCTGTTGCTGGCCGTTCTCGGCTATGGCGCCTATCGCGG CGCCGAGTACATCCTGCCGTACGCCGACCGGCCGATCGCCAAGGTCAGTGTCGAGGGCGACCTCAGCTACATCAGCCAGCGCGCGGTGCAGCAGCGGATC TCCCCGTACCTGGCGGCGAGCTTCTTCACCATCGACCTGGCGGGCATGCGCGGGCAACTGGAACAGATGCCCTGGATCGCCCACGCCGAGGTGCGCCGGG TGTGGCCGGACCAGGTGGTGATCCGCCTGGACGAGCAACTGCCGATCGCGCGGTGGGGCGACGAAGCGCTGCTGAACAACCAGGGACAGGCTTTTACGCC
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| Amino Acid Sequence |
>D-alanine--D-alanine ligase
MNLCLDSLLNGTQDPKAFGRVAVLFGGKSAEREVSLKSGAMVLQSLLAAGVDAFGIDVGEDLLQRLVEEKIDRAFIILHGRGGEDGSMQGLLECAGIPYT GSGVLASALAMDKLRTKRVWLSLGLPTPDYAVLASEDDCREAAQRLGFPLIVKPAHEGSSIGMAKVGGLDELIAAWREAARYDSQVLVEQWISGPEFTVA TLRGQVLPAIRLGTPHTFYDYDAKYLASDTRYQVPCGLDEAKERELKELTARACDALGIQGWGRADVMQDAKGRFWLLEVNTAPGMTDHSLVPMAARAAG LDFQQLVLAILADSREARG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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