Pseudomonas aeruginosa BWH031, AJ71_00941
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH031 adTxV-supercont1.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGCGAGCTGCGCCAGATCACCCACCAGGGGCCGATGCTGCTGCAGGCGCAGAAGAACGACATCCGCCTGGAAGCCGAGCAGAGCGTGGAGGTCAGCG CCAGCCAGCAGCACGTGCTGGTCACCGCGAAGGAGCACATCACCCTGATGTGCGGCGGCGCCTACCTGACCCTCAAGGGCGGCAACATCGAGCTGGGCAT GCCCGGCAACTTCGTGGTCAAGGCGGCGAAGCACAGTCATGTCGGTCCCGCTCATGCATCGACCAGCTTCAACGCCTGGGATTCGACACCGTTCGATGAC CGGTATGTCCTGCGCGACGAAGCCACGCTGGAGCCGTTACCCAATATCGCCGTTGAAGTGATACGAGGCGATGGTGGTGTGGTGAAACTGATGACCGACA GCCAGGGCCGTTTACCCAAGCAACAACACCTGGCCATGGACCCGGTGCAGATACGCATCCTGGGCAAGGGCAGTCACAACAGCGACACGGAGTCCAACAC
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| DNA Sequence for Gene |
>AJ71_00941
ATGAGCAGCGAACCGCTCGAGCCGAATCAGGATGTGATCATCCCTCGCTCTCGCGACAGGCTGGGACGGCCTGTCTACAAGGCGCAGTTGACCCGTACCG ACAACCAGAGCGAAAAGGTGGCACTGGTTCGGCAGACCGCTCCCCTGCCGGTGATCTTCATTCCGGGGATCATGGGAACCAACCTGCGCAACAAGGCAGA CAAGAGCAAGATCTGGAGGCCGCCGAACGGTCTCTGGCCCATGGATGACCTGTTTGCCTCAATCGGAGCGTTATGGACCTGGTATTGGCGAGATGCAAAG GCTCGTCAAAGATTGCTGAAAGCGGAGAGAGTGGAAGTCGATGACCAGGGTACGATCGATGTCGGTCAATCTGGTTTGTCCGAAGAAGCTGCCCGCCTGC GCGGCTGGGGCAAGGTCATGCGCAGTGCGTATAACCCGGTCATGGGATTAATGGAGAGGCGACTGGAAAACATCGTCAGCCGCCGGGAACTCCAGGCATG GTGGAATGACGAAGCCCTCTCTCCTCCTGCAGATCAGGGTGAGGAGCAGGGAAAGGTTGGGCCGATCGATGAAGAGGAATTGCTCAAGGCCAGCCGATAC CAGTTCGACGTCTGGTGCGCCGGTTATAACTGGCTACAGTCCAACCGGCAGTCGGCGCTGGATGTACGCGACTACATCGAGAACACGGTGTTGCCTTTCT ACCAGAAGGAGCATGGTCTCGATCCCGAGCAAGTGAGTCGTATGAAAGTCATTCTGGTCACCCACTCGATGGGAGGGCTGGTGGCGCGGGCCTTGACGCA GTTGCACGGCTATGAGCGCGTATTGGGGGTGGTACATGGCGTACAACCTGCGACGGGTTCCTCGACCATCTACCATCATATGCGCTGTGGCTATGAAGGT ATCGCACAGGTCGTGCTGGGACGAAATGCCGGTGAAGTGACAGCCGTTGTCGCCAATTCGGCCGGCGCGCTGGAGTTGGCCCCTAGCGCCGAATACCGGG AAGGACGTCCCTGGCTGTTTCTGTGCGACGCGCAAGGCCAGGTACTCAAGGATATCGATGGAAAGCCTCGGGCTTATCCGCAGAATCAGGACCCTTATGA AGAGATATACAAGAGCTCTACGTGGTATGGATTGGTGCCTGAGCAAAATGCACAATATCTGGACATGTCAGACAAAAAAGAAAGTTTAAGAGTTGGCCCC CGTGATAACTTTGAAGACTTGATAGATAGCATTGCTAAGTTTCATGGTGAATTGTCAGCAGCAGGCTATCACTCAGAGACCTATGCCCATTACGGAGCTG ACGATAGCCGCCATAGTTGGCGCGACCTGATCTGGAAGGGTGACCCTACCCCTCTGGAGACCCCTGGTGCCACACTCAACGACGATGAGAACGGCACTTA CAACAGTTGGTTCCGTCGGGGCTTGCCCACCATAGTGCAGGGTCCGCTGGAGGCGGGAAATCCACTGGACGCTTCCGGCAGCGGAGGTGACGAAACGGTA CCGACCGACTCCGGCCAGGCGCCTGCCCTGGCGGGCGTCAAGGCCAGCTTTCGGCATGGCAGCAAGGGCAAGGGACAGGCCAATACCAAACGGGGCTATG AGCACCAGGAGAGTTACAACGATGCTCGTGCTCAATGGGCAGCGCTATATGGGGTGATCAAAATCACCCAGTTGGCGGATTGGCATCCTAATGACAAAGG AGGGACATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCATCCCCGTCGGTTGCTTGCTGTACTTGGGTTGGTGGTCTTGACCAGCATGACCAGTTGCACTTCGTTTTCTTCTTCTCGGAGCTCTTCCATGGACAA GACCGGATGGATCACTCATTGCTTTGGTCGCTTTCTGATTGATCTGCCACCTGACGCGGTAGTCAATGCCGGATACTACCTATGGGGAGACAGAATTGAG TACTTAGATGATAAACCTACCGAACTGGCAGCCAGGGTTGATCGTCTTGAACAAGAGTGGAGGACTCAGAAGCATAAATCCAAAGGTAACATGTTTCTTC GTAAAATTGACTTTGGCAATGAATCAGTAGGCTTATTGTCTTGGTCTTCAGAGGTTGCCTCTAAAACCTATTTATTGGATACCTATGTTACATCTAAGCC TACGTGGCATGCCTATCGTTGGAAAGGGAAAGTTTCGGTAGACAGAGAGCAACGTGCTGTAGAGATGTCTAGGACTTTAGCTCGAAATCTACGCTCGCGC
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| Amino Acid Sequence |
>membrane protein
MSSEPLEPNQDVIIPRSRDRLGRPVYKAQLTRTDNQSEKVALVRQTAPLPVIFIPGIMGTNLRNKADKSKIWRPPNGLWPMDDLFASIGALWTWYWRDAK ARQRLLKAERVEVDDQGTIDVGQSGLSEEAARLRGWGKVMRSAYNPVMGLMERRLENIVSRRELQAWWNDEALSPPADQGEEQGKVGPIDEEELLKASRY QFDVWCAGYNWLQSNRQSALDVRDYIENTVLPFYQKEHGLDPEQVSRMKVILVTHSMGGLVARALTQLHGYERVLGVVHGVQPATGSSTIYHHMRCGYEG IAQVVLGRNAGEVTAVVANSAGALELAPSAEYREGRPWLFLCDAQGQVLKDIDGKPRAYPQNQDPYEEIYKSSTWYGLVPEQNAQYLDMSDKKESLRVGP RDNFEDLIDSIAKFHGELSAAGYHSETYAHYGADDSRHSWRDLIWKGDPTPLETPGATLNDDENGTYNSWFRRGLPTIVQGPLEAGNPLDASGSGGDETV PTDSGQAPALAGVKASFRHGSKGKGQANTKRGYEHQESYNDARAQWAALYGVIKITQLADWHPNDKGGT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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