Pseudomonas aeruginosa BWH031, AJ71_00616
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH031 adTxV-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGTCTGCGACTACCTGCGCATCATGTCCTCCGGCAACATGGCGCCGCACGAGCTGGAAGGCCTGTTCGACATGGAGCTGTCCAGTCTCAAGGAGGACCTG GAGCATCCGTCCCACGCGGTGACCAAGGTCGCCGACGCCCTGCCGGGCTTCGGTATCGTCGCCGCGGTACTCGGCATTGTCATCACCATGGCGTTGCTTG GCGAAGGCAGCCAGGCGGAGATCGGCCACCACGTCGCCGCCGCCCTGGTGGGTACCTTCCTCGGGATTCTCGCCGCCTACGGCTTCGTCGGCCCGCTGGC CGTCGCGCTGGAGCACGATGCCAAGGAAGAGTTGAACATGTTCGAGGCGATCAAGGCCTGCCTGGTCGCTTCCGCTTCCGGCATGCCGCCTTCGCTGGCC GTCGAGTTCGGCCGCAAGGTGCTGCTGCCCGCCCATCGGCCGACCTTCGCCGAGCTCGAGCAGGCCGTGCGTGGCCGCTGAGTGGAGGCACTGTCGATAG
|
|
| DNA Sequence for Gene |
>AJ71_00616
ATGGACAATAACCAGCCGATCATCGTCAAGCGCGTCAAGCGCTATGCCGCCGGCCACCACGGCGGCTCGTGGAAGATCGCCTTCGCCGACTTCGCCACGG CGATGATGGCGTTCTTCCTGGTGCTCTGGCTGCTGTCTTCGGCCACCCCGGAGCAGAAGAAGGCGATTTCCGGATACTTCCAGGACCCCATCGGTTTCAG CGAAAGCGCCAGCCCCTACGTCATCGACCTCGGCGGCACGCCGACGCCGGCGCCGGACAAGACCCTCAATCCGCAGGTCCAGGCCCAGCCGGACTCCAAC GAAAGCCGGATCAGCCCCGAGCAGGACCACCAGGTCAACGCCGACCAGGCCGAGAACCTCGCCGAGCAGGTTGAGCGAGAGCGCCTGGCGCTGCTGCTGC AGGAGTTGCAGAACAAGGTCGACGAAAATCCGATGCTCAAGGACTTCAAGGACCAGATCCACTTCGAGATCACCCGCGACGGCCTGCGCATCCAGATCGT CGACGCCGCCAACCGGCCGATGTTCGACCTCGGCAGCGCGCGCCTGCAGCCGTATTTCGAGGACATCCTGCTGGCCATGGCCGAGACCATCCGCCAGGTG CCGAACAAGATCAGCATCAGCGGCCACACCGACGCCAAGCCCTATGCCGGCAACGGCGACTTCGGCAACTGGGAGCTATCGGCCAATCGCGCCAACGCCG CGCGCCGAGCACTGGTCGCCGGCGGCTATCCGGAAGGGCAGATCGCCCAGGTTGTCGGCTATGCCTCGGCACGCCTGTTCGACGACAAGGACCCGCTGAA CCCGGTGAACCGGCGGATCGACATCGTGGTCCTGACCCGCAAGGCGCAGAAGGCCATCGAAGGCGAGACCGGCGCTCCCGAAGCCAGCGCCCCCGCGGCT GCCCCGGGCGAGCAGCCGAAGCCGGCTGCCGAGGCACCGGCGGCGGGCGCGCAACCTTCGCTACCGGCGGACGAGGTGCAGAAGAAGCTCAACCTGTTCG ACGACGGCGGCAGCCTGAAGCTGGAGCAGATCAAGGGCGACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGTTCAGTAGTCCGTTTCCGGCATGCTTGCCAGAATGTGCCGGTAGCTGGCCATGCGTTGCGGCATGATGCGCCCGTCCTCCAAAGCCTGGAGCAGGGCG CAACCTGGTTCACGGTCGTGCTTGCAGTCGCGGAAGCGGCAATGTCCGAGCAGGTCGCGGAACTCGATGAAACCGGCCTCGACATCGTCTCGCGACACGT GCCCCAGGCCGAACTCACGGATGCCGGGCGAGTCGATCAGGTCGCCGCCGCCGGGAAAATGGAACAGTCGCGCGGTGGTGGTGGTATGGGTGCCCTTGCC GGTCACCGTGGAGAGGTCGCCGACACGGGTGTCGACACCTGGCAACAAGGCATTCACCAGCGACGACTTGCCCACCCCGGACTGCCCGACGAAGACGCTC ACGTGACCGTCCAGCGCGCCGCGCAGTTCGTCCATCGCCAGGCCATTGAAGGCCGACACCTCGATCAGCGGGTAACCCAGGGTGCGGTAGACATTCAGCA
|
|
| Amino Acid Sequence |
>flagellar motor protein MotB
MDNNQPIIVKRVKRYAAGHHGGSWKIAFADFATAMMAFFLVLWLLSSATPEQKKAISGYFQDPIGFSESASPYVIDLGGTPTPAPDKTLNPQVQAQPDSN ESRISPEQDHQVNADQAENLAEQVERERLALLLQELQNKVDENPMLKDFKDQIHFEITRDGLRIQIVDAANRPMFDLGSARLQPYFEDILLAMAETIRQV PNKISISGHTDAKPYAGNGDFGNWELSANRANAARRALVAGGYPEGQIAQVVGYASARLFDDKDPLNPVNRRIDIVVLTRKAQKAIEGETGAPEASAPAA APGEQPKPAAEAPAAGAQPSLPADEVQKKLNLFDDGGSLKLEQIKGD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|