Pseudomonas aeruginosa BWH031, AJ71_00575
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH031 adTxV-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAACTTTAGCCCTCCTTTCCGTTTTTATCTTTGTTATTGGAAATCAGTCATTTAGGCATTTCTCCGAATCCCCTTCGGAGAGCTACAGCCCAGGCTTCAC AAGGCCTGAACCGTTCCTAGGAATAACTCTACAACGATATTGAAGCGGTTAGAAACTGCACGTCACTGGTGCGTTCCACGCACTAATTGAGGTCCTCTTT TTCAATGAAAGTGCAGGACAGAGCGGTTTTTAAAATTAATATGAACATGAACTTCCCGTAATTCGGTACTTGGCGGAAAAAGTCGATTCGAATACGACAT GAACATATCCGTTAGCGACGCCACGTTCGGCGCAAAACCCTGTGACGGATTCGTCATAAGCCAGCGAATGCTCTATCGCGAGACTTGCCGGCAGTAATAA GCGTCGCGCGGCACTCCGGCAAGCGAGCTTTCCTCCCCACGTCATTCCGTTTATTCATATAACGCGTTCCGCCCGCTCCACCCGCGCCAGGAAACCCGCC
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| DNA Sequence for Gene |
>AJ71_00575
ATGCTGAACAAACGCCGCCTGCCGTCGATGACCGCCCTGCAATGCTTCGAAGCGGTAGCCCGGCACCTGAGCTTCACCCGCGCCGCCGAAGAGTTGAGCC TGACCCAGAGCGCCATGAGCAAGCAGGTCGCGCAACTCGAGGAGCAACTGCAGCACGCCCTGTTCCGCCGGGTGCGCAAGCGCTTGCAACTGACCCCGGC CGGCGAGCTGTACCTGGCCGAGGTACGACGCATCCTGCAACAGGTAGAGCTGTCCACCCGCTTCCTGCTTTCCTACGGCGGCGAGACCGAAGTGCTGCGA GTGGCGACCCCGCCGACCTTCGGCGCGCGCTGGCTGATCCCGCAACTGAACGGCTGGCGCCACCGCCACCCGAACATCCACCTCGACCTGCGCCAGGAAC TGGAACCGGACGACCTGCGCCAGGGCCATTGCGACCTGGCGTTCTTCTTCGGCCCCGGCACCCTGCCGGGCGCCGAGTGCATCCGCCTGTTCGGCGAACA ACTGGTGGCGGTCTGCGCGCCATCCCTGTTGCCGGCCGGCGGACTGGACGAACCGACCCAACTGGCGGAGCTGGTGCTGCTGCAGAACGCCAGCCGCGCG GAGGCCTGGCACGACTGGTTCGCCAGCCTGGAGCGAAATTGCCAGGGTTGCTACCACGGTCCACGCTTCGACACCTTCTACATGTGCATCCGCGCCGCCC AGGCCGGTTGCGGGGTAGCCCTGCTACCGCGCTTCCTGGTCGAGGAGGAACTCGCCGAAGGCAAGCTGGCGATCGCCTGGCCGCACGCCCTGCCCAGCCA GGAGGCCTACTACCTGGCCTATCCCGAGCATGCCGCGGAAGTCCCCAAGGTGCGCCATTTCATCGAGTGGATGGTAGAGCGCCTGGAGCAGGAGCAACCC TCAGCGGGCCCCCGCCAGACGCGCCACGGCCCGGTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGTTTCCGCTGCGCGGAACCATCTTTACTCTCACTCGGTTCACCTCGGAACGTCCCATGCTCACTGGCGTCACGGTTCGAATCCGCCTGCTGGTCCTGGC GCTGCTACCGCTGACGATGCTCGTCACGGTCATCGCGATGGCGCTGGCCAACGCCAGTCGACTCGATGCCAGCTTCCAGGACCTTTTCAACAACCGGATG AAGCCCATCAGCCAGCTCAAGATCGTCGCCGACGCCGTTGCGGTCAGCGTGGTCGACGCCCTGCACAAGTACCGTGCGGGGGTCTTCGATGAAGAGCGCC TGCAGCAGGAGTTGAGTGGGGCGCTGTCGCGCATCGAGAAGTCGTGGGCCGACTATTCCGCAGACCACCGGACTGCCGCCGAGAAGGAAATCATCGAGTC GCTGGTCCCCACCCTGGAACGGGTCAAGCGGATGACCCTGGCATACGGCGAGCAGGCCAGGGCCGGAAGCCTGCGAAACGTCGAGGCCGGCACGTTCAAT
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MLNKRRLPSMTALQCFEAVARHLSFTRAAEELSLTQSAMSKQVAQLEEQLQHALFRRVRKRLQLTPAGELYLAEVRRILQQVELSTRFLLSYGGETEVLR VATPPTFGARWLIPQLNGWRHRHPNIHLDLRQELEPDDLRQGHCDLAFFFGPGTLPGAECIRLFGEQLVAVCAPSLLPAGGLDEPTQLAELVLLQNASRA EAWHDWFASLERNCQGCYHGPRFDTFYMCIRAAQAGCGVALLPRFLVEEELAEGKLAIAWPHALPSQEAYYLAYPEHAAEVPKVRHFIEWMVERLEQEQP SAGPRQTRHGPV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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