Pseudomonas aeruginosa BWH030, AJ70_05957
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH030 adTwj-supercont1.51, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
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| DNA Sequence for Gene |
>AJ70_05957
GCCAGCGGCAAGCTGAGCCTGGCCCAGGCCTCCAGCCAGGGCGACCTGAAGATCGCGGCCCAGGCCGTGGAGCTGAACGGCAAGACCTACGCCGGCGGCA GCGCCGAGATTCGCAGCGTGGAGGAACTGGTCAACCGGCAGAGCCTGGCGGCGCGCGAACGCATCGCGCTGGAGGCGGCGCATATCGACAACGCCGGGGT GATCGAAGCCGGCGTCGAGCCAGACGAGCGACGCAACGCGCGCGGCGACCTCGAGCTGCGCAGCGGCACCCTGCGCAACGCCGGCAGCCTGGTGGCCAGC CGCGCGCTGGAAGCGAAGGCGAGCCAGGCGCTGGACAACCAGGGCGGCAGCCTGAAGGGGGCGACCGTCCGGGTCGACGGCGGGCACCTGGACAACCGTG GCGGCAAGCTGCTCGCCGAGGGCGAACTGCGGGTCGAGGCGAGCAGCCTGGACAACCGCCAGGACGGCCTGTTGCAGAGCCGGGACCGCGCCGTGGTCAA GACCCGTGGCGATCTCGACAACCGTGGCGGCCAGGTGATCGGCCTGAACGACCTGGAGGTCGGCGCGGCGACGCTCGACAACGGCCAGCAAGGCCTGCTC GGCAGCCAGCAGTCCACCCGCGTCAGCGCCCAGGCGCTGGTCAACCGGGGGGACGGCGAAGTCTCCGGCAAGCGCGTCGAGGCCCGCGTCGGTAGCCTCG ACAATCGCGGCGGCAAGCTGATCGGCGACGACCTGCTGGTGGTCGCCAGCGGTGCCATCGACAACCGCCTCGGCTTGTTCTCCGCAGCCAACCGCCTCGA CCTGCGGGCGCGCAGCCTGGACAACAGCGGCAAGGGCACGCTGAGCAGCCGGGGCGGCCTGGAGGTCAGCCTCGGCGGCCTGCTGGACAACCGCGATGAA GGCAACCTGCTCAGCCAGGGCGCGCAGCGCGTGACGGTGGGGCAACTGGACAACCGCGCCGGCGGCCTGCTGTCGAGCCGCAGCGAGTTGAACGTCCACG GCGCCAGCCTGGACAACCGTGGCGGCGTGCTGGTGGCCGACGCCGGCCTGAGCGCCACGGGAGGCGCCTTCGACAACCGCGACGGCGGCAGCGCCAGCGG CAAGGCTGGCGTGCGCGTGGAGGTCGCCAGCCTGCGCAACGACCAGGGTGGCAAGCTGCTCAGCGATGGCCGCCTGGACCTCGCAGCGAACGCCGTCGGC AACGCCGGAGGGCGTATCGCCGCCAAGGGCGACCTGCAGGCGACGCTTGGCAGCCTGGCCCAGCAAGGTGGCGAACTGGTCAGCGAAAAGACCCTGAAGG TCGCGGCCGACACGCTCGACAACAGCCAGTCCGGGCTGATCGCCGCGAATGGCGGCATCGCTATCGAGGCGCGGCAGGTCGACAACCGCGCCGGCGAGAT TTCCAGCACCTCGAAGGTCGCCGTGAACGCCCGCGAGCAACTGGACAACCGCGGCGGCAAGGTCATCGGCGACAGCGGCCTGCGCCTCACCGTGCAGCGC CTGCTGAACCAGGCCAAGGGGGTGCTGGCCGGGCGCGACGGCCTGAGCCTGGACGGCGGCGAACTGTTCAACGGCGACGGCGGTCGGCTCGACAGCCAGA ACAGCCTGAGCGTGAGCCTCGGCGGCGTGCTGGACAACCAGGGCGGCGCGCTGGTCAGCGAAGGCAGCCTGACGGCGCGCGCCGCGCGCCTGGACAACCG TGGCGGAACCTTCTCCAGCGCCGGTGCGCTGGCGCTGACCAGCCAGGCCGCGCTGGACAACCAGGGCGGCAGGCTGCTCAGCGATGCCGGCGTGACGCTG AAGGGCGCCAGCCTCGACAACAGCCGTTCCGGCGTGATCAGCGCCAAGGGCGCGGTGGATATCCGCACCGGCGTGCTGGACAACAGCCGCAACGGCGGCA TCGGCAGCAACGCCGGCATCACCCTGGTGGCCGCCCGACTGGACAACGGCCAGCAGGGCCGGGTCAGCGCCAAGGGTTTGCTCGACGCCAACCTGAAAGG CCTCGACCAGCGCGGAGGCGGTGTCCTGGTCAGCGAAACCGGCGTCACCCTCGACCTCAATGGCGGCACGCTGGTCAACCGCGACGGCGGCCTGATCGCC ACGCCCGGCGCGCTGCTGCTGCGCCAGCTCGGCGCGGTGGACAACGGCGCCGGCGGGGAAATCTCCAGCGACCGCGCCTTCACCCTCGCCGCCGCCAGCC TGGACAACCGTGGCGGGCGTCTGATCGGCGCCGACAGCCTGACCCTGCGCATCGCCCAGGCCCTGGACAACAGCCTGGGCGGGGTGATCTCCGGCGCCGC CGGCCTGGACATCGCGGCCGCTCGCCTGGACAACAGCGCCAAGGGCACCCTGGCCAGTCGCGCCGGCATCGACCTGCGCGTCGATGGCGCGCTGGACAAC CACGCCGAAGGCACCGTCTCCGGCGCCCGCCTGACGCTCGCCAGCGCCTCGCTGGACAACAGCGGCAAGGGCCTGCTCTCCGGCAACGCCGGCCTGAGCG TCGCCACTGGCGCGCTGGACAACGCCGAGGGTGGCCAGTTGATCAGCCAGGGCGTCCTGGACGTCAGCAGCGCCGACCTCGACAACCGTGGCGGCGCCCT CAGTGGCAAGCAGTCGCTGCGCCTGAGCGCCGCCAACCTGGACAACCGTGGCGGCCTGCTCACCAGCGACGGCGAACTGGAACTGACGGCAGGGCGCGTC GATTCCGCCGACGGCGGCGAAATCTCCGCCCGGGGCGACCTGCGCCTGACGGTCGAGCGCCTGGTGCAACGCCAGGGCCGGCTGATCGGCGAGCGCGGCG TCAGTCTCGACCTGCGGGGCGGCGACCTGGACAACCAGGGCGGCCTGATCAGTGCCCGCGGCCCGCTGAGCATCGAGAGGCTGAACGTCCTCGACAACCG CCAGGGCGGCGAGATTTCCAGCCAGCAGGGCTTCGAGCTGCTGGCCAGGCGCATCGACAACGGCCAGCAGGGGCGCATCATCAGCGCCGGGAAACTGCGC CTGGACGCCGACGCGCTGGGCAACGCCGGCGCCGGCCTGCTCTCCGGATGGCAGGGCCTGACGGTGACAGGCGGGAGCCTGGACAACAGCGCCGGCGGCA CCCTTTCGAGCAAGGACGGCGAGCTGGCCATCAGCCTCGGCGGCGCGTTGGACAACCACGGCCAGGGCGCGCTGGTCAGCAAGGGCGCGCAACGGATCGA CGCCGCCAGCCTGGATAACGCCCAGGGCATCGTCTCCGGCGAAAGCGACGTGACCCTGAGCATC
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
C
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| Amino Acid Sequence |
>hemagglutinin
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
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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