Pseudomonas aeruginosa BWH030, AJ70_04323
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH030 adTwj-supercont1.14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATCGATCGCTACGTGTTTCCCCACGGCGAGCTGCCGCACCTGTCGCTGGCGGTGGCGTGGATGAGCGAAGCCGGGCTGGAAGTAGTCGACGTGGAAAGC CTGCGTCTGCACTACGCCCGGACCCTGGACTTTTGGAGCGCCAACCTGGAAGCCAGGCTGAAGGAGGCGGCTCGCCTGGTGCCCGAGGAAACCCTGCGGA TCTGGCGGCTGTACCTGGCCGGATGTGCCTACGGCTTCAAGCGCGGCTGGATCAACCTGCACCAGATCCTCGCCATTCGCCCCCACGAGGATGGCTCCCA CGAGCTGCCCTGGTCGCGGCGCGACCTGTACGCCTGAACGCCGGCGACCGGCTCCCTTGCGGAGCCGGTCGCGCAATCGGTCCTTGCGGATTGTCCTGCG TGGCGGGGCGGTCTAGTCTGCACGAAGTCCTGCGCGGTCGAGGGAAGCCGGGACGCTTCCGCGACAGCGCGACAACAACGATAAGAACAGGAGACTTCCC
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| DNA Sequence for Gene |
>AJ70_04323
ATGTCGCTGAGCAGACGCTTCGGTCTTTTCACGCTTGCCGCAACGGTGACCTTCAGTACCGCGGTCTTCGCCGCGCCGACCTTCATCAATATCCTCACCG GCGGCACCAGCGGGGTCTATTACCCCATAGGGGTCGGCCTCTCGCAGATCTACGGGCACGATATCCAGGGCGCGAAAACCTCGGTGCAGGCCACCAAGGC CTCGGTCGAGAACCTCAACCTGCTGCAGGCCGGGCGTGGAGAACTGGCGCTGGCGCTGGGCGACTCGGTCGCCGACGCCTGGAACGGGGTCGCCGACGCC GGCTTCAAGGCGCCGTTGAAAAAGCTGCGGGCTATCGGCAATACCTATCCGAACTATATCCAGGTAGTGGCCAGCCAAGCCTCGGGCATCAAGACCCTGG CCGACCTGAAAGGCAAACGCATTTCGGTGGGCGCGCCCAAGAGCGGTACCGAGCTGAACGCCCGGGCGATCTTCAAGGCCGCCGGCCTGAGCTACGAGGA CATGGGCAAGGTGGAGTACCTGCCCTACGCCGAGTCGGTGGAGCTGATCAAGAACCGCCAGCTCGACGCTACGCTGCAATCCTCCGGCTTGGGCATGGCG GCCATCCGCGACCTGGCCTCGACCATGCCGATCACCTTCGTCGCGATCCCGGCGGACGTGGTGGCGAAGATCGACAGCCCGGCCTACCACGCCGCGAGCA TTCCCGCCGGCACCTACGACGGCCAGGAGCAGGACGTGCCGACGGTGGCGATCGACAATATCCTGGTCAGCCACTCCGGGGTCAGCGACGAGCTGGCCTA CCAGATGACCAAGCTGATGTTCGACAACCTGCCGCGCCTGGTCACCGCCCATGCTGCCGCCAAGGACATCGCCCTGGACAAGGCGGCGAAGAACCTGCCG ATTCCGCTGCATCCCGGCGCCGAGCGCTTCTACAAGGAGAAGGGCGTACTGCCCGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCTCGTTTCTCCGTAGCCCCGGTCCGTGCGGCGGACCGGGTTCCCCGCGTTTCCGGCTGTAGGGAGTCGATGCATGAGCGATCATCAGAACGGGCTGCA CCTCGAGGCGGAAAACTGGCCGCGCGCGCTGTTCGCCGTGGCCCTGGCCTTTTCCGTGTTCCAGGTCGTCACCGCGGCCTTTCCCCTGATTTCCACCCAG GTCCTGCGGGCAATGCACGTCGGACTGCTGTTGCTGGTGGTGTACATCAGCTATCCCGCCTTCGGCATACGTCGCCCCTGGCAGCCGTTGGCCTGGTTGC TGGGCATGGCCGGCCTGGGCACGGCGGTCTACCAGTGGGTTTTCGAGGCCGACCTGATCCAGCGCTCCGGAGAGCTGACCCAGGCCGACATGGTCGTCGG CGTGGTGCTGATCGTCCTGGTCTTCGAGGCGGCGCGACGGGTGATGGGCATCGCCTTGCCGATCATCTGCGCGCTGTTTCTTGCCTATGGCCTGTTCGGC
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| Amino Acid Sequence |
>C4-dicarboxylate ABC transporter
MSLSRRFGLFTLAATVTFSTAVFAAPTFINILTGGTSGVYYPIGVGLSQIYGHDIQGAKTSVQATKASVENLNLLQAGRGELALALGDSVADAWNGVADA GFKAPLKKLRAIGNTYPNYIQVVASQASGIKTLADLKGKRISVGAPKSGTELNARAIFKAAGLSYEDMGKVEYLPYAESVELIKNRQLDATLQSSGLGMA AIRDLASTMPITFVAIPADVVAKIDSPAYHAASIPAGTYDGQEQDVPTVAIDNILVSHSGVSDELAYQMTKLMFDNLPRLVTAHAAAKDIALDKAAKNLP IPLHPGAERFYKEKGVLPE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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